|
Year | Title | Array | GEO accession number | Reference |
|
Smooth muscle cells |
|
2001 | Interleukin-13 induces dramatically different transcriptional programs in three human airway cell types | Affymetrix Hugene FL | n/a | [21] |
2004 | Effects of interleukin-1 [beta], interleukin-13, and transforming growth factor-[beta] on gene expression in human airway smooth muscle using gene microarrays | Affymetrix GeneChip 95A | n/a | [23] |
2005 | The effect of IL13 and IL13R130Q, a naturally occurring IL13 polymorphism, on the gene expression of human airway smooth muscle cells | 8159 human gene cDNA clones from Research Genetics (IMAGE consortium, Huntsville, AL), Incyte Genomics | n/a | [24] |
2007 | 1α,25-Dihydroxy-vitamin D3 stimulation of bronchial smooth muscle cells induces autocrine, contractility, and remodeling processes | Human Genome U133 Plus 2.0 GeneChip arrays | GSE5145 | [26] |
2009 | Glucocorticoid- and protein kinase A-dependent transcriptome regulation in airway smooth muscle | Affymetrix Human U133A DNA microarrays | GSE13168 | [25] |
2010 | MicroRNA expression in human airway smooth muscle cells: role of miR-25 in regulation of airway smooth muscle phenotype | mirVana miRNA bioarrays V2 (Ambion) | GSE16587 GSE16586 | [67] |
|
Epithelial cells |
|
2002 | Analysis of novel disease-related genes in bronchial asthma | Affymetrix Hugene FL | n/a | [34] |
2003 | Respiratory syncytial virus infection activates STAT signaling in human epithelial cells | Affymetrix Hugene FL | n/a | [35] |
2006 | Induction of the plasminogen activator system by mechanical stimulation of human bronchial epithelial cells | Affymetrix Human 133A DNA microarrays | n/a | [36] |
2007 | IL-13 and epidermal growth factor receptor have critical but distinct roles in epithelial cell mucin production | UCSF 9Hs Human 23K v.2 Oligo Array | GSE4804 | [37] |
2007 | Genomewide profiling identifies epithelial cell genes associated with asthma and with treatment response to corticosteroids | Human Genome U133 Plus 2.0 GeneChip arrays | GSE4302 | [41] |
2009 | Airway epithelial cells regulate the functional phenotype of locally differentiating dendritic cells: implications for the pathogenesis of infectious and allergic airway disease | Human Genome U133 Plus 2.0 GeneChip arrays | GSE12773 | [38] |
2009 | T-helper type 2-driven inflammation defines major subphenotypes of asthma | Human Genome U133 Plus 2.0 GeneChip arrays | GSE4302 | [39] |
2010 | Rhinovirus-induced modulation of gene expression in bronchial epithelial cells from subjects with asthma | Human Genome Focus GeneChip Array Human Genome U133 Plus 2.0 GeneChip arrays | GSE13396 | [40] |
2010 | Transglutaminase 2, a novel regulator of eicosanoid production in asthma revealed by genomewide expression profiling of distinct asthma phenotypes | Affymetrix Human U133A DNA microarrays Human Genome U133 Plus 2.0 GeneChip arrays | GSE13785 | [83] |
2010 | Decreased fibronectin production significantly contributes to dysregulated repair of asthmatic epithelium | Affymetrix Human 133A DNA microarrays | GSE18965 | [42] |
|
Mast Cells |
|
2001 | Gene expression screening of human mast cells and eosinophils using high-density oligonucleotide probe arrays: abundant expression of major basic protein in mast cells | Affymetrix GeneChip 95A | n/a | [51] |
2005 | Amphiregulin expression in human mast cells and its effect on the primary human lung fibroblasts | Affymetrix Genechip Human Genome U133 | n/a | [52] |
2009 | Human mast cells synthesize and release angiogenin, a member of the ribonuclease A (RNase A) superfamily | NIAID (human sequence chip series “sa”) and consist of 13,971 oligonucleotides, synthesized by Qiagen Operon Inc. (Valencia, CA, USA) | n/a | [53] |
|
Tissue |
|
2004 | Functional classes of bronchial mucosa genes that are differentially expressed in asthma | Affymetrix GeneChip 95A | GSE15823 | [22] |
2010 | Gene transcription changes in asthmatic chronic rhinosinusitis with nasal polyps and comparison to those in atopic dermatitis | Affymetrix HuExon 1.0 ST | GSE5667 | [63] |
|