CallSim: Evaluation of Base Calls Using Sequencing Simulation

<table class="table-group" id="tab2"><tr><td><table class="table"><tr><td class="thead-hr" colspan="2"><hr/></td></tr><tr class="thead"><td align="left">Test Case</td><td align="center">Sequences</td></tr><tr><td class="thead-hr" colspan="2"><hr/></td></tr><tr><td align="left" rowspan="2">(1) Ion Torrent</td><td align="center"><img alt="371718.fig.0011" src="https://static.hindawi.com/articles/isrn/volume-2012/371718/figures/371718.fig.0011.jpg"/></td></tr><tr><td align="center"><span style="font-family:monospace">CGTTTACGTGAAAGGATTGAAGATG_ATCCGT_C_ACA</span></td></tr><tr><td align="left" rowspan="2">(2) 454</td><td align="center"><img alt="371718.fig.0012" src="https://static.hindawi.com/articles/isrn/volume-2012/371718/figures/371718.fig.0012.jpg"/></td></tr><tr><td align="center"><span style="font-family:monospace">TGGCGCTCATGGCGACCTTTAAGATACAACCAGTGTTT</span></td></tr><tr class="table-tr"><td colspan="2"><hr class="tbody-hr"/></td></tr></table></td></tr><tr class="table-fn"><td>These are the reads from the two test cases in the regions of interest, and the bold green bases are the ones corresponding to the green signal of interest.<br/></td></tr></table>

International Scholarly Research Notices

tab2

Table 2

Table 2: CallSim: Evaluation of Base Calls Using Sequencing Simulation 