Metagenome Fragment Classification Using -Mer Frequency Profiles
Table 4
MEGAN's
top-ten strains for the Sargasso Sea dataset, their respective reads, and
comparison to the NBC 9 mer and 15 mer methods. N/A means the strain is not in
our training set (it is unfinished so it cannot be found. Burkholderia and
Shewanella which were also found by Venter et al.
[33] also have high matches in
the NBC. The NBC's detection of Candidatus Pelagibacter drastically changes
from to .
High strain content in sample (genome size—bothsides)
