Genomic Promoter Analysis Predicts Functional Transcription Factor Binding

Table 3

Rules associated with HNF1 and HNF4 binding identified by 10-fold cross-validation of BAMarray analysis.

TFBS family	Negative association	Positive association
E2F	HNF1-pancreas	HNF4 binding
ETS	HNF1-both	None
MAF	HNF1-hepatocytes	None
NFκB	HNF1-any	None
Homeobox	HNF4-pancreas	None
SOX/TCF	HNF4-both	None
Homeobox	HNF4-hepatocytes	None
FOX/Homeobox	HNF4-any	None