Properties of the solanaceous chloroplast genomes.
Property
Name of species
ABE
CAN
DST
NSY
NTA
NTO
NUN
SBU
SLY
STU
Genome size (bp)
156687
156781
155871
155941
155943
155745
155863
155371
155461
155296
LSC (bp) (coordinates)*
86,869 (1–86869)
87366 (1–87366)
86297 (1–86297)
86684 (1–86684)
86,686 (1–86686)
86392 (1–86392)
86633 (1–86633)
85785 (1–85785)
85,882 (1–85882)
85737 (1–85737)
IRB (bp) (coordinates)*
25,905 (86870–112774)
25783 (87367–113149)
25563 (86298–111860)
25342 (86685–112026)
25,343 (86687–112029)
25429 (86393–111821)
25331 (86634–111964)
25588 (85786–111373)
25,608 (85883–111490)
25593 (85738–111330)
SSC (bp) (coordinates)*
18,008 (112775–130782)
17849 (113150–130998)
18448 (111861–130308)
18573 (112027–130599)
18,571 (112030–130600)
18495 (111822–130316)
18568 (111965–130532)
18381 (111374–129754)
18,363 (111491–129853)
18373 (111331–129703)
IRA (bp) (coordinates)*
25,905 (130783–156687)
25783 (130999–156781)
25563 (130309–155871)
25342 (130600–155941)
25,343 (130601–155943)
25429 (130317–155745)
25331 (130533–155863)
25588 (129755–155342)
25,608 (129854–155461)
25593 (129704–155296)
Coding regions (%)
58.89
58.50
59.19
61.49
61.12
61.58
63.12
58.52
58.91
58.45
Introns (%)
12.51
12.71
11.62
12.70
12.70
12.68
12.69
12.82
12.47
12.49
Intergenic regions (%)
28.60
28.79
29.19
25.81
26.18
25.73
24.19
28.66
28.62
29.06
AT content (%)
Overall
62.44
62.27
62.12
62.15
62.15
62.21
62.12
62.12
62.14
62.12
Coding regions
59.86
59.68
59.65
59.85
59.79
59.79
59.70
59.61
59.65
59.59
Noncoding regions
66.13
65.93
65.72
65.84
65.87
66.09
66.27
65.66
65.71
65.68
tRNAs
47.70
47.38
47.08
47.06
47.05
47.10
47.08
47.12
47.01
47.06
rRNAs
44.64
44.73
44.63
44.64
44.64
44.64
44.64
44.66
44.66
44.65
Protein-coding genes
62.01
61.83
61.79
61.91
61.86
61.84
61.68
61.76
61.80
61.74
LSC
64.37
64.25
64.04
64.05
64.05
64.12
64.01
63.99
64.01
63.99
SSC
68.35
67.99
67.72
67.94
67.93
68.03
67.87
67.87
67.97
67.91
IR
57.14
56.94
56.87
56.78
56.78
56.84
56.78
56.93
56.91
56.90
ABE: Atropa belladonna, CAN: Capsicum annuum, DST: Datura stramonium, NSY: Nicotiana sylvestris, NTA: Nicotiana tabacum, NTO: Nicotiana tomentosiformis, NUN: Nicotiana undulata, SBU: Solanum bulbocastanum, SLY: Solanum lycopersicum, STU: Solanum tuberosum, LSC: large single copy region, SSC: small single copy region, and IR: inverted repeat region. *Start and end position of nucleotide in the genome.
