Comparative Genomics of Ten Solanaceous Plastomes

Table 3

InDels in nucleotide sequences of 9 genes of ten solanaceous plastid genomes.

S. number	Gene^abc	Total number of InDels	InDel length (bp)
1	accD^a	4	24, 9, 141, 6
2	clpP^a	24	8(I), 14(I), 13(I), 7(I), 1(I), 2-3(I), 7(I), 1–7(I), 3(I), 2(I), 3(I), 1–7(I), 1–3(I), 1(I), 1(I), 1(I), 1–5(I), 4–7(I), 1(I), 9(I), 1-2(I), 3(I), 5(I), 24–30
3	ndhA^b	14	9(I), 5-6(I), 3(I), 1(I), 9(I), 3(I), 4(I), 1–4(I), 1-2(I), 1–23(I), 1-2(I), 2(I), 1(I), 3(I)
4	rpl32^b	2	2-3, 4
5	rps16^a	11	1–38, 9(I), 1(I), 1(I), 5(I), 1-2(I), 5(I), 4(I), 6(I), 1(I), 9
6	sprA^b	2	109, 7
7	trnA-UGC^c	1	102–130
8	trnL-UAA^a	4	1, 6, 71, 4
9	ycf1^b	31	3, 18, 18, 21, 6, 6, 48, 9, 6, 6, 42, 3, 6, 30, 3, 15, 12–39, 18, 6, 9–36, 6, 6, 6, 9, 9, 12, 6, 6, 6, 57, 6

Location in different regions; ^aLSC, ^bSSC, and ^cIR; I: InDels present in introns.