Research Article
A Highly Conserved GEQYQQLR Epitope Has Been Identified in the Nucleoprotein of Ebola Virus by Using an In Silico Approach
Table 1
Conserved regions from proteins identified by EBI Clustal Omega program.
| | Sequence | Protein | Position |
| | EGLMHNQDGLICGLRQLANETTQALQLFLRATTEL | Glycoprotein (GP) | 545–633 | | RTFSILNRKAIDFLLQRWGGTCHILGPDCCIEPHDW | | TKNITDKIDQIIHDFVDK |
| | DGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEAN | Nucleoprotein (NP) | 112–419 | | AGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAE | | QGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQ | | GMHMVAGHDANDAVISNSVAQARFSGLLIVKTVL | | DHILQKTERGVRLHPLARTAKVKNEVNSFKAALSS | | LAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIALG | | VATAHGSTLAGVNVGEQYQQLREAATEAEKQLQQ | | YAESRELDHLGLDDQEKKILMNFHQKKNEISFQQT | | NAMVTLRKERLAKLTEAITAASLPKTSG |
| | GIPDHPLRLLRIGNQAFLQEFVLPPVQLPQYFTFDLT | Matrix protein (VP40) | 141–197 | | ALKLITQPLPAATWTDDTPT |
| | IHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQ | Polymerase cofactor (VP35) | 295–340 | | DGKTLGLKI |
| | LTVPPAPKDICPTLKKGFLCDSSFCKKDHQLESLTD | Transcription activator (VP30) | 62–111 | | RELLLLIARKTCGS |
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