Research Article
FN-Identify: Novel Restriction Enzymes-Based Method for Bacterial Identification in Absence of Genome Sequencing
Table 3
Primer sequences used for 16S rRNA.
| ID | Gene name | Name | Sequence | Reference |
| 1 | 16S rRNA | 8F | 5′AGAGTTTGATCCTGGCTC AG3′ | [31] | 2 | 16S rRNA | U1492R | 5′GGTTACCTTGTTACGACTT3′ | [32] | 3 | 16S rRNA | 928F | 5′TAAAACTYAAAKGAATTGACGGG3′ | [33] | 4 | 16S rRNA | 336R | 5′ACTGCTGCSYCCCGTAGGAGTCT3′ | [33] | 5 | 16S rRNA | 1100F | 5′YAACGAGCGCAACCC3′ | [34] | 6 | 16S rRNA | 1100R | 5′AGGGTTGCGCTCGTTG3′ | [34] | 7 | 16S rRNA | 907R | 5′CCGTCAATTCCTTTRAGTTT3′ | [34] | 8 | 16S rRNA | 785F | 5′GGATTAGATACCCTGGTA3′ | [35] | 9 | 16S rRNA | 805R | 5′GACTACCAGGGTATCTAATC3′ | [36] | 10 | 16S rRNA | 515F | 5′GTGCCAGCMGCCGCGGTAA3′ | [34] | 11 | 16S rRNA | 518R | 5′GTATTACCGCGGCTGCTGG3′ | [37] | 12 | 16S rRNA | 27F | 5′AGAGTTTGATCMTGGCTCAG3′ | [38] | 13 | 16S rRNA | 1541R | 5′AAGGAGGTGATCCAGCCGCA3′ | [31] | 14 | HSP60 | HSP60-F | 5′ATGGCWAARGANNTHAARTT3′ | Designed | 15 | HSP60 | HSP60-R | 5′TCDGCVACNACNGCTTCNGA3′ | Designed |
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16S rRNA selected primers.
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