In Silico Analysis of Gene Expression Network Components Underlying Pigmentation Phenotypes in the Python Identified Evolutionarily Conserved Clusters of Transcription Factor Binding Sites

Table 3

InterPro domain annotation for pigmentation associated python transcription factors.

Gene	Protein name	StartPos	EndPos	DomainId	Domain name
CREB	cAMP response element-binding protein	87	146	IPR003102	Coactivator CBP, pKID
CREB	cAMP response element-binding protein	284	342	IPR004827	Basic-leucine zipper domain
FOXD3	Forkhead box D3	71	173	IPR011991	Winged helix-turn-helix DNA binding domain
LEF-1	Lymphoid enhancer-binding factor 1	1	65	IPR027397	Catenin binding domain
LEF-1	Lymphoid enhancer-binding factor 1	1	209	IPR013558	CTNNB1 binding, N-terminal
LEF-1	Lymphoid enhancer-binding factor 1	293	375	IPR009071	High mobility group box domain
MITF	Microphthalmia-associated transcription factor	303	370	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
MITF	Microphthalmia-associated transcription factor	393	519	IPR021802	MiT/TFE transcription factors, C-terminal
MITF	Microphthalmia-associated transcription factor	4	142	IPR031867	MiT/TFE transcription factors, N-terminal
POU3F2	POU Class 3 Homeobox 2	51	125	IPR000327	POU-specific domain
POU3F2	POU Class 3 Homeobox 2	125	205	IPR009057	Homeodomain-like
USF-1	Upstream transcription factor 1	193	286	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Start and end positions are provided for each domain detected in the transcription factor protein sequences.