Systematic Bioinformatic Approach for Prediction of Linear B-Cell Epitopes on Dengue E and prM Protein

Table 4

Overlapping epitopes of the prM protein.

BepiPred	Ellipro	SVMTriP
^4TTRGGEPHMIVSKQERG^20; EP2/prM	^1FHLTTRGGE^9; EP1/prM	NP
	^15SKQERGKS^22; EP3/prM
^44LCEDTMTYKCPRITEAEPDDVDCWCNATDTWVTYGTCSQTGEHRRDKRSV^93; EP6/prM	^55RITEAEPDDVD^65; EP7/prM	NP
^125TWALR^129; EP10/prM; ^145GTSITQ^150; EP13/prM	^115GAWKQIQRVETWALRHPGFTVILALFLAHAIGTSITQKGIIFILLMLVTPS^165; EP12/prM	^127ALRHPGFTILALFLAHAIGT^146; EP11/prM

NP: no prediction in the relevant region; bold italics indicates sequences that overlap between the predicted epitopes by three different tools.