Prediction and In Silico Identification of Novel B-Cells and T-Cells Epitopes in the S1-Spike Glycoprotein of M41 and CR88 (793/B) Infectious Bronchitis Virus Serotypes for Application in Peptide Vaccines
Table 3
Prediction of MHCI binding epitopes in the S1 glycoprotein of M41 IBV strains and their characteristic antigenicity scores.
Epitope position
Peptide sequence
Conservancy %
Antigenicity scores
18
VTPLLLVTL
98.82
0.8935
19
TPLLLVTLL
9882
0.7935
176
VNNLTSVYL
98.82
0.6733
192
SNETTDVTS
82.35
0.6575
208
GGPITYKVM
100
1.3364
214
KVMREVKAL
80.00
0.4479
356
WFNSLSVSI
98.82
1.1016
387
AYSYGGPSL
49.41
0.9013
462
NVTDSAVSY
100
0.6936
465
DSAVSYNYL
100
0.9786
467
AVSYNYLAD
100
0.5294
470
YNYLADAGL
96.47
0.5650
471
NYLADAGLA
96.47
0.9234
472
YLADAGLAI
96.47
1.0681
513
FVVSGGKLV
98.82
0.6146
Note: only epitopes with 0.4 and above scores are presented.
