Random versus Deterministic Descent in RNA Energy Landscape Analysis

Table 2

Partial energy landscapes; denotes the length of sequences (number of nucleotides), is the energy offset above the MFE structure, is the number of secondary structures within the partial energy landscape defined by , and is the number of local minima within identified by RNAsubopt and Barriers.

Number	Gene name
1	PAX7	99	16.2	14,340,878	50,861	282.0
2	OXT	99	15.0	14,164,430	74,426	190.3
3	GMEB1	113	10.5	15,845,050	466,093	34.0
4	LIG3	124	13.0	15,525,022	317,284	48.9
5	CBR1	284	6.0	10,987,435	643,999	17.1
6	HTR3E	302	9.0	15,095,701	533,316	28.3
7	HLA-G	386	4.2	15,791,146	906,393	17.4
8	ALDH4A1	400	5.4	15,186,200	540,609	28.1
9	MRPL9	407	6.2	14,023,048	41,979	334.0
10	AQP5	504	5.5	11,173,352	714,812	15.6