In Silico Screening of Aptamers Configuration against Hepatitis B Surface Antigen

Table 1

Short single-strand DNA (ssDNA) aptamers sequence obtained based on the loop and hairpin structure available from each H01, H02, and H03.

No.	Aptamer name	Aptamer original	Sequence (5′-3′)
1	H01a	H01	-CCACAGCGAACAGCGCGGCAGG-
2	H01b	H01	-GCGGGACATAATAGTGCTTACTACGACCTGC-
3	H02a	H02	-GGGAATTCGAGCTCGGTACCC-
4	H02b	H02	-ATGAAGTATTATTACCCAAT-
5	H03a	H03	-GCTCGCTGCAGGCATGCAAGC-

The bold and underlined alphabets were the sequences selected to design the three-dimensional conformation based on the hairpin formed in the two-dimensional structure.