Review Article

Applications of Potential Energy Surfaces in the Study of Enzymatic Reactions

Scheme 3

Chemical model used in the study on the mechanism of AlkB. The substrate and cosubstrate (α-KG) are modeled as 3-methyl-4-amino pyrimidinyl cation and pyruvate, respectively. Atoms marked by an * were held fixed at their crystal structure (PDB: 2FD8) positions [21].
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