Research Article
Chemical Exposure Generates DNA Copy Number Variants and Impacts Gene Expression
Table 7
Genes with altered expression mapping within CNVs in the 2 mM EMS treatment.
| CNV region | Gene expression array data | Chromosome | Genomic region | Gain/loss | Chromosome | Genomic region | Sequence ID | Fold change | Human gene | Gene symbol |
|
6 |
49556168–50808094 |
Loss | 6 | 49674955–49688887 | ENSDART00000002693 | −5.037 | Syntaxin 16 | STX16 | 6 | 49947447–49963592 | BC066706.1 | −2.129 | Eukaryotic translation initiation factor 2, subunit 2 beta | EIF2S |
| 8 | 32921651–33404812 | Loss | 8 | 32982721–32982807 | NM_001039461 | −6.194 | Mediator complex subunit 12 | MED12 |
|
18 |
31915173–33340460 |
Loss | 18 | 32385597–32398337 | NM_201108 | −5.699 | Solute carrier family 33 (acetyl-CoA transporter), member 1 | SLC33A1 | 18 | 32408894–32442474 | NM_200587 | −13.404 | Guanine monophosphate synthetase | GMPS |
| 21 | 8967733–9185499 | Gain | 21 | 9178136–9675872 | ENSDART00000054092 | −9.299 | AT rich interactive domain 5B (MRF1-like) | ARID5B |
| 21 | 21053248–21398259 | Loss | 21 | 21135672–21166560 | NM_001080007 | −3.236 | Calpain 5 | CAPN5 |
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