|
| LOH gene clusters | Gene name | Common | Description |
|
| 9q31q34 | 221294_at | GPR21 | G-protein-coupled receptor 21 |
| 221085_at | TNFSF15 | Tumor necrosis factor (ligand) superfamily, member 15 |
| 220935_s_at | CDK5RAP2 | CDK5 regulatory subunit associated protein 2 |
| 220300_at | RGS3 | Regulator of G-protein signalling 3 |
| 220202_s_at | MNAB | Membrane-associated nucleic acid binding protein |
| 220201_at | MNAB | Membrane-associated nucleic acid binding protein |
| 219884_at | LHX6 | LIM homeobox protein 6 |
| 218941_at | FBXW2 | F-box and WD-40 domain protein 2 |
| 218489_s_at | ALAD | Aminolevulinate, delta-, dehydratase |
| 218487_at | ALAD | Aminolevulinate, delta-, dehydratase |
| 218160_at | NDUFA8 | NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 8, 19 kDa |
| 215813_s_at | PTGS1 | Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| 214465_at | ORM2 | Orosomucoid 2 |
| 214425_at | AMBP | Alpha-1-microglobulin/bikunin precursor |
| 214040_s_at | GSN | Gelsolin (amyloidosis, Finnish type) |
| 211503_s_at | RAB14 | RAB14, member RAS oncogene family |
| 210825_s_at | STOM | Stomatin |
| 210824_at | STOM | Stomatin |
| 209162_s_at | PRPF4 | PRP4 pre-mRNA processing factor 4 homolog (yeast) |
| 209161_at | PRPF4 | PRP4 pre-mRNA processing factor 4 homolog (yeast) |
| 208828_at | POLE3 | Polymerase (DNA directed), epsilon 3 (p17 subunit) |
| 208737_at | ATP6V1G1 | ATPase, H+ transporting, lysosomal 13 kDa, V1 subunit G isoform 1 |
| 205599_at | TRAF1 | TNF receptor-associated factor 1 |
| 205500_at | C5 | Complement component 5 |
| 205477_s_at | AMBP | Alpha-1-microglobulin/bikunin precursor |
| 205128_x_at | PTGS1 | Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| 205127_at | PTGS1 | Prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) |
| 205041_s_at | ORM1 | Orosomucoid 1 |
| 205040_at | ORM1 | Orosomucoid 1 |
| 204449_at | PDCL | Phosducin-like |
| 204448_s_at | PDCL | Phosducin-like |
| 203971_at | SLC31A1 | Solute carrier family 31 (copper transporters), member 1 |
| 203823_at | RGS3 | Regulator of G-protein signalling 3 |
| 203447_at | PSMD5 | Proteasome (prosome, macropain) 26S subunit, non-ATPase, 5 |
| 201062_at | STOM | Stomatin |
| 201061_s_at | STOM | Stomatin |
| 201060_x_at | STOM | Stomatin |
| 200928_s_at | RAB14 | RAB14, member RAS oncogene family |
| 200927_s_at | RAB14 | RAB14, member RAS oncogene family |
| 200696_s_at | GSN | Gelsolin (amyloidosis, Finnish type) |
|
| 10p11.21q26.3 | 32094_at | CHST3 | Carbohydrate (chondroitin 6) sulfotransferase 3 |
| 222072_at | ADD3 | Homo sapiens clone DT1P1A11 mRNA, CAG repeat region |
| 221136_at | GDF2 | Growth differentiation factor 2 |
| 219963_at | DUSP13 | Dual specificity phosphatase 13 |
| 219957_at | RUFY2 | RUN and FYVE domain containing 2 |
| 219543_at | MAWBP | MAWD binding protein |
| 219509_at | MYOZ1 | Myozenin 1 |
| 218878_s_at | SIRT1 | Sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) |
| 218871_x_at | GALNACT-2 | Chondroitin sulfate GalNAcT-2 |
| 218445_at | H2AFY2 | H2A histone family, member Y2 |
| 218249_at | ZDHHC6 | Zinc finger, DHHC domain containing 6 |
| 218046_s_at | MRPS16 | Mitochondrial ribosomal protein S16 |
| 218006_s_at | ZNF22 | Zinc finger protein 22 (KOX 15) |
| 218005_at | ZNF22 | Zinc finger protein 22 (KOX 15) |
| 216903_s_at | CBARA1 | Calcium binding atopy-related autoantigen 1 |
| 216345_at | KIAA0913 | KIAA0913 protein |
| 216037_x_at | TCF7L2 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
| 216035_x_at | TCF7L2 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
| 214878_at | ZNF37A | Zinc finger protein 37a (KOX 21) |
| 214617_at | PRF1 | Perforin 1 (pore forming protein) |
| 214508_x_at | CREM | cAMP responsive element modulator |
| 214366_s_at | ALOX5 | Arachidonate 5-lipoxygenase |
| 214348_at | TACR2 | Tachykinin receptor 2 |
| 214338_at | DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| 214322_at | CAMK2G | Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma |
| 214136_at | NUDT13 | Nudix (nucleoside diphosphate linked moiety X)-type motif 13 |
| 213952_s_at | ALOX5 | Arachidonate 5-lipoxygenase |
| 213647_at | DNA2L | DNA2 DNA replication helicase 2-like (yeast) |
| 212894_at | SUPV3L1 | Suppressor of var1, 3-like 1 (S. cerevisiae) |
| 212762_s_at | TCF7L2 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
| 212761_at | TCF7L2 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
| 212759_s_at | TCF7L2 | Transcription factor 7-like 2 (T-cell specific, HMG-box) |
| 212757_s_at | CAMK2G | Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma |
| 212669_at | CAMK2G | Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma |
| 212594_at | PDCD4 | Programmed cell death 4 (neoplastic transformation inhibitor) |
| 212593_s_at | PDCD4 | Programmed cell death 4 (neoplastic transformation inhibitor) |
| 212359_s_at | KIAA0913 | KIAA0913 protein |
| 212322_at | SGPL1 | Sphingosine-1-phosphate lyase 1 |
| 212321_at | SGPL1 | Sphingosine-1-phosphate lyase 1 |
| 211809_x_at | COL13A1 | Collagen, type XIII, alpha 1 |
| 211668_s_at | PLAU | plasminogen activator, urokinase |
| 211343_s_at | COL13A1 | Collagen, type XIII, alpha 1 |
| 210956_at | PPYR1 | Pancreatic polypeptide receptor 1 |
| 210671_x_at | MAPK8 | Mitogen-activated protein kinase 8 |
| 210588_x_at | HNRPH3 | Heterogeneous nuclear ribonucleoprotein H3 (2H9) |
| 210477_x_at | MAPK8 | Mitogen-activated protein kinase 8 |
| 210318_at | RBP3 | Retinol binding protein 3, interstitial |
| 210171_s_at | CREM | cAMP responsive element modulator |
| 210110_x_at | HNRPH3 | Heterogeneous nuclear ribonucleoprotein H3 (2H9) |
| 209910_at | SLC25A16 | Solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), member 16 |
| 209869_at | ADRA2A | Adrenergic, alpha-2A-, receptor |
| 209860_s_at | ANXA7 | Annexin A7 |
| 209834_at | CHST3 | Carbohydrate (chondroitin 6) sulfotransferase 3 |
| 209817_at | PPP3CB | Protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) |
| 209538_at | ZNF32 | Zinc finger protein 32 (KOX 30) |
| 209457_at | DUSP5 | Dual specificity phosphatase 5 |
| 209045_at | XPNPEP1 | X-prolyl aminopeptidase (aminopeptidase P) 1, soluble |
| 208990_s_at | HNRPH3 | Heterogeneous nuclear ribonucleoprotein H3 (2H9) |
| 208770_s_at | EIF4EBP2 | Eukaryotic translation initiation factor 4E binding protein 2 |
| 208769_at | EIF4EBP2 | Eukaryotic translation initiation factor 4E binding protein 2 |
| 208535_x_at | COL13A1 | Collagen, type XIII, alpha 1 |
| 208453_s_at | XPNPEP1 | X-prolyl aminopeptidase (aminopeptidase P) 1, soluble |
| 208381_s_at | SGPL1 | Sphingosine-1-phosphate lyase 1 |
| 208252_s_at | CHST3 | Carbohydrate (chondroitin 6) sulfotransferase 3 |
| 208152_s_at | DDX21 | DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 21 |
| 208095_s_at | CAMK2G | Calcium/calmodulin-dependent protein kinase (CaM kinase) II gamma |
| 207965_at | NEUROG3 | Neurogenin 3 |
| 207630_s_at | CREM | cAMP responsive element modulator |
| 207543_s_at | P4HA1 | Procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha polypeptide I |
| 207347_at | ERCC6 | Excision repair cross-complementing rodent repair deficiency, complementation group 6 |
| 207127_s_at | HNRPH3 | Heterogeneous nuclear ribonucleoprotein H3 (2H9) |
| 206747_at | KIAA0514 | KIAA0514 gene product |
| 206261_at | ZNF239 | Zinc finger protein 239 |
| 206159_at | GDF10 | Growth differentiation factor 10 |
| 206010_at | HABP2 | Hyaluronan binding protein 2 |
| 205882_x_at | ADD3 | Adducin 3 (gamma) |
| 205879_x_at | RET | Ret proto-oncogene (multiple endocrine neoplasia and medullary thyroid carcinoma 1, Hirschsprung disease) |
| 205479_s_at | PLAU | Plasminogen activator, urokinase |
| 204446_s_at | ALOX5 | Arachidonate 5-lipoxygenase |
| 204445_s_at | ALOX5 | Arachidonate 5-lipoxygenase |
| 204120_s_at | ADK | Adenosine kinase |
| 204119_s_at | ADK | Adenosine kinase |
| 203916_at | NDST2 | N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2 |
| 203666_at | CXCL12 | Chemokine (C-X-C motif) ligand 12 (stromal cell-derived factor 1) |
| 203187_at | DOCK1 | Dedicator of cyto-kinesis 1 |
| 203079_s_at | CUL2 | Cullin 2 |
| 203078_at | CUL2 | Cullin 2 |
| 203074_at | ANXA8 | Annexin A8 |
| 202867_s_at | DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| 202866_at | DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| 202865_at | DNAJB12 | DnaJ (Hsp40) homolog, subfamily B, member 12 |
| 202777_at | SHOC2 | soc-2 suppressor of clear homolog (C. elegans) |
| 202731_at | PDCD4 | Programmed cell death 4 (neoplastic transformation inhibitor) |
| 202730_s_at | PDCD4 | Programmed cell death 4 (neoplastic transformation inhibitor) |
| 202524_s_at | SPOCK2 | Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 |
| 202523_s_at | SPOCK2 | Sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 2 |
| 202432_at | PPP3CB | Protein phosphatase 3 (formerly 2B), catalytic subunit, beta isoform (calcineurin A beta) |
| 202364_at | MXI1 | MAX interacting protein 1 |
| 202361_at | SEC24C | SEC24 related gene family, member C (S. cerevisiae) |
| 201859_at | PRG1 | Proteoglycan 1, secretory granule |
| 201858_s_at | PRG1 | Proteoglycan 1, secretory granule |
| 201753_s_at | ADD3 | Adducin 3 (gamma) |
| 201752_s_at | ADD3 | Adducin 3 (gamma) |
| 201376_s_at | HNRPF | Heterogeneous nuclear ribonucleoprotein F |
| 201366_at | ANXA7 | Annexin A7 |
| 201034_at | ADD3 | Adducin 3 (gamma) |
| 200931_s_at | VCL | Vinculin |
| 200930_s_at | VCL | Vinculin |
| 200871_s_at | PSAP | Prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) |
| 200866_s_at | PSAP | Prosaposin (variant Gaucher disease and variant metachromatic leukodystrophy) |
| 200697_at | HK1 | Hexokinase 1 |
|
| 13q11q12 | 36830_at | MIPEP | Mitochondrial intermediate peptidase |
| 221995_s_at | MRP63 | Mitochondrial ribosomal protein 63 |
| 221771_s_at | HSMPP8 | M-phase phosphoprotein, mpp8 |
| 220753_s_at | CRYL1 | Crystallin, lambda 1 |
| 218479_s_at | XPO4 | Exportin 4 |
| 213262_at | SACS | Spastic ataxia of Charlevoix-Saguenay (sacsin) |
| 208742_s_at | SAP18 | sin3-associated polypeptide, 18 kDa |
| 208741_at | SAP18 | sin3-associated polypeptide, 18 kDa |
| 208740_at | SAP18 | sin3-associated polypeptide, 18 kDa |
| 208590_x_at | GJA3 | Gap junction protein, alpha 3, 46 kDa (connexin 46) |
| 207302_at | SGCG | Sarcoglycan, gamma (35 kDa dystrophin-associated glycoprotein) |
| 206404_at | FGF9 | Fibroblast growth factor 9 (glia-activating factor) |
| 204387_x_at | MRP63 | Mitochondrial ribosomal protein 63 |
| 204386_s_at | MRP63 | Mitochondrial ribosomal protein 63 |
| 204305_at | MIPEP | Mitochondrial intermediate peptidase |
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