Table of Contents Author Guidelines Submit a Manuscript
Genetics Research International
Volume 2015, Article ID 431487, 14 pages
http://dx.doi.org/10.1155/2015/431487
Review Article

Importance of Genetic Diversity Assessment in Crop Plants and Its Recent Advances: An Overview of Its Analytical Perspectives

1Centre for Plant Breeding and Genetics, Tamil Nadu Agricultural University, Coimbatore 641 003, India
2International Crops Research Institute for the Semi-Arid Tropics, Patancheru, Telangana 502324, India
3School of Life Science, Bharathidasan University, Tiruchirappalli 620 024, India

Received 17 July 2014; Revised 24 November 2014; Accepted 27 November 2014

Academic Editor: Igor B. Rogozin

Copyright © 2015 M. Govindaraj et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Citations to this Article [36 citations]

The following is the list of published articles that have cited the current article.

  • Pugnal Mattedi Andr eacute, Soares Laurindo Bruno, Jos eacute Henriques da Silva Derly, Nick Gomes Carlos, Lopes Bhering Leonardo, and Alves de Souza Moacil, “Selection of okra parents based on performance and genetic divergence,” African Journal of Biotechnology, vol. 14, no. 45, pp. 3044–3050, 2015. View at Publisher · View at Google Scholar
  • G. Haritha, T. Sudhakar, D. Chandra, T. Ram, B. Divya, and N. Sarla, “Informative ISSR Markers Help Identify Genetically Distinct Accessions of Oryza rufipogon in Yield Improvement,” Rice Science, vol. 23, no. 5, pp. 225–241, 2016. View at Publisher · View at Google Scholar
  • Quang Ong, Phuc Nguyen, Nguyen Phuong Thao, and Ly Le, “Bioinformatics Approach in Plant Genomic Research.,” Current genomics, vol. 17, no. 4, pp. 368–78, 2016. View at Publisher · View at Google Scholar
  • M.T. Abraha, H. Shimelis, M. Laing, K. Assefa, and B. Amelework, “Assessment of the genetic relationship of tef (Eragrostis tef) genotypes using SSR markers,” South African Journal of Botany, vol. 105, pp. 106–110, 2016. View at Publisher · View at Google Scholar
  • Elyas Aryakia, Hamid Reza Karimi, Mohammad Reza Naghavi, and Seyed Abolhassan Shahzadeh Fazeli, “Morphological characterization of intra-and interspecific diversity in some Iranian wild Allium species,” Euphytica, 2016. View at Publisher · View at Google Scholar
  • Tae-Sung Kim, Qiang He, Kyu-Won Kim, Min-Young Yoon, Won-Hee Ra, Feng Peng Li, Wei Tong, Jie Yu, Win Htet Oo, Buung Choi, Eun-Beom Heo, Byoung-Kook Yun, Soon-Jae Kwon, Soon-Wook Kwon, Yoo-Hyun Cho, Chang-Yong Lee, Beom-Seok Park, and Yong-Jin Park, “Genome-wide resequencing of KRICE_CORE reveals their potential for future breeding, as well as functional and evolutionary studies in the post-genomic,” Bmc Genomics, vol. 17, 2016. View at Publisher · View at Google Scholar
  • Íngara Keisle São Paulo Barretto Miranda, Anderson Fontes Suzart Miranda, Fernanda Vidigal Duarte Souza, Marcos André Vannier-Santos, Carlos Priminho Pirovani, Iuri Muniz Pepe, Ivanoé João Rodowanski, Katiúcia Tícila de Souza Eduvirgens Ferreira, Luciano Mendes Souza Vaz, and Sandra Aparecida de Assis, “The biochemical characterization, stabilization studies and the antiproliferative effect of bromelain against B16F10 murine melanoma cells,” International Journal of Food Sciences and Nutrition, pp. 1–13, 2016. View at Publisher · View at Google Scholar
  • J.A. Castro, E.J. Oliveira, O.N. Jesus, T.L. Soares, and G.R.A. Margarido, “Molecular markers for conservation genetic resources of four Passiflora species,” Scientia Horticulturae, vol. 212, pp. 251–261, 2016. View at Publisher · View at Google Scholar
  • Larbouga Bourgou, Mahamadou Sawadogo, Denys Sanfo, and Jean-Marc Lacape, “SSR-based genetic diversity of traditional and perennial cotton (Gossypium spp.) populations collected in Burkina Faso,” Genetic Resources and Crop Evolution, 2016. View at Publisher · View at Google Scholar
  • Sahar Saki, Hedayat Bagheri, Ali Deljou, and Mehrshad Zeinalabedini, “Evaluation of genetic diversity amongst Descurainia sophia L. genotypes by inter-simple sequence repeat (ISSR) marker,” Physiology And Molecular Biology Of Plants, vol. 22, no. 1, pp. 97–105, 2016. View at Publisher · View at Google Scholar
  • Pawan Sharma, Sharad Tiwari, Niraj Tripathi, and Anoop K. Mehta, “Polymorphism analysis in advanced mutant population of oat (Avena sativa L.) using ISSR markers,” Physiology And Molecular Biology Of Plants, vol. 22, no. 1, pp. 115–120, 2016. View at Publisher · View at Google Scholar
  • N Anjali, K M Ganga, F Nadiya, S Shefeek, and K K Sabu, “Intraspecific variations in cardamom (Elettaria cardamomum Maton): assessment of genomic diversity by flow cytometry, cytological studies and ISSR analysis.,” SpringerPlus, vol. 5, no. 1, pp. 1560, 2016. View at Publisher · View at Google Scholar
  • Dharmendra Singh, Ram Sewak Singh Tomar, Rita Nongthombam, Nandini Chongtham, Moirangthem Premjit Singh, Madan Pal, Chandan Kumar Singh, Jyoti Taunk, Priyanka Jain, Ashish Kumar Chaturvedi, Sadhana Maurya, Sourabh Karwa, and Rajendra Singh, “Molecular Scanning and Morpho-Physiological Dissection of Component Mechanism in Lens Species in Response to Aluminium Stress.,” PloS one, vol. 11, no. 7, 2016. View at Publisher · View at Google Scholar
  • Emmanuel O. Omondi, Thomas Debener, Marcus Linde, Mary Abukutsa-Onyango, Fekadu F. Dinssa, and Traud Winkelmann, “Molecular Markers for Genetic Diversity Studies in African Leafy Vegetables,” Advances in Bioscience and Biotechnology, vol. 07, no. 03, pp. 188–197, 2016. View at Publisher · View at Google Scholar
  • Brhan Khiar Saleh, Remmy W. Kasili, Edward G. Mamati, Woldeamlak Araia, and Aggrey B. Nyende, “Classification of Local Pepper Collections (<i>Capsicum spp.</i>) from Eritrea Using Morphological Traits,” American Journal of Plant Sciences, vol. 07, no. 03, pp. 590–600, 2016. View at Publisher · View at Google Scholar
  • Juliana Maria Fachinetto, Miguel Dall'Agnol, Cleber Henrique Lopes de Souza, Roberto Luis Weiler, and Carine Simioni, “Genetic diversity of a Paspalum notatum Flügge germplasm collection,” Revista Brasileira de Zootecnia, vol. 46, no. 9, pp. 714–721, 2017. View at Publisher · View at Google Scholar
  • Lunwen Qian, Lee T. Hickey, Andreas Stahl, Christian R. Werner, Ben Hayes, Rod J. Snowdon, and Kai P. Voss-Fels, “Exploring and Harnessing Haplotype Diversity to Improve Yield Stability in Crops,” Frontiers in Plant Science, vol. 8, 2017. View at Publisher · View at Google Scholar
  • Aejaz Ahmad Dar, Reetika Mahajan, Padma Lay, and Susheel Sharma, “Genetic diversity and population structure of Cucumis sativus L. by using SSR markers,” 3 Biotech, vol. 7, no. 5, 2017. View at Publisher · View at Google Scholar
  • Md Abdur Rahim, Arif Hasan Khan Robin, Sathishkumar Natarajan, Hee-Jeong Jung, Jeongyeo Lee, HyeRan Kim, Hoy-Taek Kim, Jong-In Park, and Ill-Sup Nou, “Identification and Characterization of Anthocyanin Biosynthesis-Related Genes in Kohlrabi,” Applied Biochemistry and Biotechnology, 2017. View at Publisher · View at Google Scholar
  • Hadi Alipour, Mohammad R. Bihamta, Valiollah Mohammadi, Seyed A. Peyghambari, Guihua Bai, and Guorong Zhang, “Genotyping-by-Sequencing (GBS) Revealed Molecular Genetic Diversity of Iranian Wheat Landraces and Cultivars,” Frontiers in Plant Science, vol. 8, 2017. View at Publisher · View at Google Scholar
  • Atena Shadmehr, Hossein Ramshini, Mehrshad Zeinalabedini, Masoud Parvizi Almani, Mohammad Ghaffari, Ali Izadi Darbandi, and Mahmoud Fooladvand, “Phenotypic Variability Assessment of Sugarcane Germplasm (Saccharum officinarum L.) and Extraction of an Applied Mini-Core Collection,” Agriculture, vol. 7, no. 7, pp. 55, 2017. View at Publisher · View at Google Scholar
  • Catherine Nnamani, Sunday Ajayi, Happiness Oselebe, Christopher Atkinson, Anastasia Igboabuchi, and Eucharia Ezigbo, “Sphenostylis stenocarpa (ex. A. Rich.) Harms., a Fading Genetic Resource in a Changing Climate: Prerequisite for Conservation and Sustainability,” Plants, vol. 6, no. 3, pp. 30, 2017. View at Publisher · View at Google Scholar
  • Leticia A. Egea, Rosa Mérida-García, Andrzej Kilian, Pilar Hernandez, and Gabriel Dorado, “Assessment of Genetic Diversity and Structure of Large Garlic (Allium sativum) Germplasm Bank, by Diversity Arrays Technology “Genotyping-by-Sequencing” Platform (DArTseq),” Frontiers in Genetics, vol. 8, 2017. View at Publisher · View at Google Scholar
  • O. Gyeom Kim, Kyu Jin Sa, Jung-Ro Lee, and Ju Kyong Lee, “Genetic analysis of maize germplasm in the Korean Genebank and association with agronomic traits and simple sequence repeat markers,” Genes & Genomics, 2017. View at Publisher · View at Google Scholar
  • Filipe Inácio Matias, Italo Stefanine Correa Granato, Gabriel Dequigiovanni, and Roberto Fritsche-Neto, “Be-Breeder - an application for analysis of genomic data in plant breeding,” Crop Breeding and Applied Biotechnology, vol. 17, no. 1, pp. 54–58, 2017. View at Publisher · View at Google Scholar
  • Márcia Carvalho, María Muñoz-Amatriaín, Isaura Castro, Teresa Lino-Neto, Manuela Matos, Marcos Egea-Cortines, Eduardo Rosa, Timothy Close, and Valdemar Carnide, “Genetic diversity and structure of Iberian Peninsula cowpeas compared to world-wide cowpea accessions using high density SNP markers,” BMC Genomics, vol. 18, no. 1, 2017. View at Publisher · View at Google Scholar
  • Divya Sharma, Gautam Jamra, Uma M. Singh, Salej Sood, and Anil Kumar, “Calcium Biofortification: Three Pronged Molecular Approaches for Dissecting Complex Trait of Calcium Nutrition in Finger Millet (Eleusine coracana) for Devising Strategies of Enrichment of Food Crops,” Frontiers in Plant Science, vol. 7, 2017. View at Publisher · View at Google Scholar
  • Andrew W. Gichira, Zhizhong Li, Josphat K. Saina, Zhicheng Long, Guangwan Hu, Robert W. Gituru, Qingfeng Wang, and Jinming Chen, “ The complete chloroplast genome sequence of an endemic monotypic genus Hagenia (Rosaceae): structural comparative analysis, gene content and microsatellite detection ,” PeerJ, vol. 5, pp. e2846, 2017. View at Publisher · View at Google Scholar
  • Mohammad Nisar, Asaf Khan, Syed Fazal Wadood, Aftab Ali Shah, and Fatih Hanci, “Molecular characterization of edible pea through EST-SSR markers,” Turkish Journal Of Botany, vol. 41, pp. 338–346, 2017. View at Publisher · View at Google Scholar
  • Sidney Vasconcelos do Nascimento, Marcelo Murad Magalhães, Roberto Lisboa Cunha, Paulo Henrique de Oliveira Costa, Ronnie Cley de Oliveira Alves, Guilherme Corrêa de Oliveira, and Rafael Borges da Silva Valadares, “Differential accumulation of proteins in oil palms affected by fatal yellowing disease,” Plos One, vol. 13, no. 4, pp. e0195538, 2018. View at Publisher · View at Google Scholar
  • Guillermo Sánchez-de la Vega, Gabriela Castellanos-Morales, Niza Gámez, Helena S. Hernández-Rosales, Alejandra Vázquez-Lobo, Erika Aguirre-Planter, Juan P. Jaramillo-Correa, Salvador Montes-Hernández, Rafael Lira-Saade, and Luis E. Eguiarte, “Genetic Resources in the “Calabaza Pipiana” Squash (Cucurbita argyrosperma) in Mexico: Genetic Diversity, Genetic Differentiation and Distribution Models,” Frontiers in Plant Science, vol. 9, 2018. View at Publisher · View at Google Scholar
  • Reza Darrudi, Vahideh Nazeri, Forouzandeh Soltani, Majid Shokrpour, and Marria Raffaella Ercolano, “Genetic diversity of Cucurbita pepo L. and Cucurbita moschata Duchesne accessions using fruit and seed quantitative traits,” Journal of Applied Research on Medicinal and Aromatic Plants, 2018. View at Publisher · View at Google Scholar
  • Anjan Hazra, Nirjhar Dasgupta, Chandan Sengupta, and Sauren Das, “Next generation crop improvement program: Progress and prospect in tea ( Camellia sinensis (L.) O. Kuntze),” Annals of Agrarian Science, 2018. View at Publisher · View at Google Scholar
  • Mostafa Abdelrahman, Sudisha Jogaiah, David J. Burritt, and Lam-Son Phan Tran, “Legume genetic resources and transcriptome dynamics under abiotic stress conditions,” Plant, Cell & Environment, 2018. View at Publisher · View at Google Scholar
  • Humera Saeed, Muhammad Ehetisham-ul-Haq, Muhammad Atiq, Muhammad Kamran, Muhammad Idrees, Shaukat Ali, Muhammad Burhan, Muhammad Mohsan, Muhammad Iqbal, Shahid Nazir, and Saleem Il Yasin, “Prediction of cotton leaf curl virus disease and its management through resistant germplasm and bio-products,” Archives of Phytopathology and Plant Protection, pp. 1–17, 2018. View at Publisher · View at Google Scholar
  • Rukmini Mishra, and Kaijun Zhao, “Genome editing technologies and their applications in crop improvement,” Plant Biotechnology Reports, 2018. View at Publisher · View at Google Scholar