International Journal of Evolutionary Biology

Research Article

Phylogenetic Position of Aquificales Based on the Whole Genome Sequences of Six Aquificales Species

Table 1

List of B-type conserved proteins that the Aquificales is clustered with ε-proteobacteria in the phylogenetic analysis (Figure 4). Accession numbers of conserved proteins of Hydrogenobacterthermophilus TK-6 are indicated.
Accession numberPutative function
YP_003431690transcription elongation factor
YP_003432239ribosomal protein S9
YP_003432379ribosomal protein L18
YP_0034328924-hydroxy-3-methylbut-2-enyl diphosphate reductase
YP_003432936ATP-dependent protease
YP_003433556UDP-N-acetylglucosamine pyrophosphorylase
YP_003431738putative metalloprotease
YP_003431749diaminopimelate decarboxylase
YP_003431809dihydrodipicolinate reductase
YP_003431998UDP-N-acetylglucosamine 1-carboxyvinyltransferase
YP_003432481ribosomal protein S20
YP_003432953queuine tRNA-ribosyltransferase
YP_003431834ATP-dependent protease La
YP_003431839tRNA delta(2)-isopentenylpyrophosphate transferase
YP_0034318732-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
YP_003431915ribonuclease III
YP_003432036riboflavin synthase alpha chain
YP_003432044DNA polymerase I
YP_0034321492-methylthioadenine synthetase
YP_003432165folylpolyglutamate synthase
YP_003432232DNA polymerase III beta subunit
YP_003432262UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
YP_003432385methionine aminopeptidase
YP_003432408methionyl-tRNA synthetase
YP_003432463fatty acid/phospholipid synthesis protein
YP_003433015carboxyl-terminal protease
YP_003433058rRNA methylase
YP_0034333773-phosphoshikimate 1-carboxyvinyltransferase
YP_003433542arginyl-tRNA synthetase
YP_003431843F0F1-type ATP synthase gamma subunit
YP_003431889signal recognition particle GTPase
YP_003432507ribosomal protein L22
YP_003432144Holliday junction resolvase
YP_003432824DNA processing protein
YP_003432257GTP-binding protein
YP_003432274triosephosphate isomerase
YP_003432330aspartate 1-decarboxylase
YP_003432353uridylate kinase
YP_003432374ribosomal protein L24
YP_003432380ribosomal protein S5
YP_003432524transcription antitermination protein
YP_003432640methionyl-tRNA formyltransferase
YP_003433333ribosomal protein L20
YP_003432384adenylate kinase
YP_003432390ribosomal protein S4
YP_003432414thiol peroxidase
YP_003432533orotidine 5′-phosphate decarboxylase
YP_003432615S-adenosyl-methyltransferase
YP_003432911carbamoyl-phosphate synthase small subunit
YP_003432886dihydrodipicolinate synthase
YP_003432967membrane protein
YP_003432968GMP synthase
YP_003433028hypothetical protein HTH_1376
YP_003433124homoserine kinase
YP_003433221UDP-glucose-4-epimerase
YP_003433380pantothenate metabolism flavoprotein
YP_003433549cell cycle protein