Research Article

Synthetic Antimicrobial Peptides Exhibit Two Different Binding Mechanisms to the Lipopolysaccharides Isolated from Pseudomonas aeruginosa and Klebsiella pneumoniae

Table 1

Definition of the RESIDUES found in the Six Tic-Oic containing analogs.

AMP numberResidue A1Residue B2Residue C3Residue D4Residue E5

22NoneNoneNoneNoneLys/Arg
70NoneNoneNoneNoneLys
71NoneNoneNoneNoneOrn
72NoneNoneNoneNoneDpr
73NoneNoneNoneNoneDab
74GlyNoneNoneNoneLys
75NoneNoneGlyNoneLys
76GlyNoneGlyNoneLys
77NoneNoneNoneGlyLys
78NoneGlyNoneNoneLys
79NoneGlyNoneGlyLys
80None-AlaNoneGlyLys

(1) Residue A is the residue preceding each internal Lys residues (N-terminal side of the Lys).
(2) Residue B is the residue following each internal Lys residues (C-terminal side of the Lys).
(3) Residue C is the residue preceding each internal Phe residue (N-terminal side of the Phe).
(4) Residue D is the residue following each internal Phe residues (C-terminal side of the Phe).
(5) Residue E replaces the charged Lys residues with charged residues with progressively shorter side chains.