Cross-Chip Probe Matching Tool: A Web-Based Tool for Linking Microarray Probes within and across Plant Species

Table 3

Summary table of the number of probes that are linked between the various arrays currently in the CCPMT from the array in row to the arrays in columns. The above and below diagonal elements are slightly different for the methods we used such as Blasn, and percent identity is not always reflexive.

	Affymetrix AG	Affymetrix ATH1	AFGC	Agilent	CATMA	Operon	Affymetrix Poplar Genome Array
Affymetrix AG	—	7828	12170	7018	7193	8361	7744
Affymetrix ATH1	7827	—	30066	19188	20521	24636	17279
AFGC	12171	30066	—	29622	26070	30509	17793
Agilent	7018	19188	29622	—	18563	21371	16913
CATMA	7192	20521	26070	18561	—	23082	16378
Operon	8362	24636	30509	21371	23081	—	17505
Affymetrix Poplar Genome Array	7744	17279	17793	16912	16378	17504	—