Recent Advances in Cotton Genomics

Table 2

QTLs or genes identified for various traits in cottons.

Traits/genes	Parental materials	Reference
Resistance to the bacterial blight pathogen	Empire B2/B3/B2b6, S295 and Pima S-7^*	[42]
Resistance to the bacterial blight pathogen	CS50 and Pima S-7^*	[43]
Density of leaf and stem trichomes	Pima S-7 and Empire B2b6^*	[44]
Fiber quality and yield	CAMD-E and Sea Island Seaberry^*	[45]
Agronomic and fiber traits	MARCABUCAG8US-1-88 and HS46	[46]
Cotton leaf morphology and other traits	Seaberry and Deltapine 61 with morphological mutants^*	[47]
Productivity and quality	Siv’on and F-177^*	[48]
Physiological variables and crop productivity	Siv’on and F-177^*	[49]
Fiber quality	TM-1 and 3-79^*	[25]
Yield components, fiber, flowering date, et al.	TM-1 and 3-79^*	[50]
Rf1 fertility-restoring gene	CMS and the restoring lines	[51]
Fiber quality	Siv’on and F-177^*	[52]
Fiber strength	7235 and TM-1	[53]
Rf1 fertility-restoring gene	XiangyuanA, ZMS12A, Sumian16A and 0-613-2R	[54]
Fiber-related traits	Acala-44 and Pima S-7^*	[27]
Agronomic and fiber quality traits	MD5678ne and Prema	[55]
Fiber and yield traits	MARCABUCAG8US-1-88, HS46, MD5678ne et al.	[56]
Resistance to Verticillium wilt	Pima S-7 and Acala 44^*	[57]
Fiber elongation	Tamcot 2111 and Pima S6^*	[58]
Fiber length, length uniformity, and short fiber content	Tamcot 2111 and Pima S6^*	[59]
Fiber fineness and micronaire (MIC)	Tamcot 2111 and Pima S6^*	[60]
Li1, Li2, N1, Fbl, n2, sma-4(ha), and sma-4(fz)	Pima S-7, Li1, Li2, N1, Fbl,n2, SMA4, A1-97^*	[61]
Leaf morphology	TMS-22 and WT936^*	[31]
Leaf morphological traits and chlorophyll content	TM-1 and Hai 7124	[62]
Fiber quality traits	TM1 and Pima 3-79^*	[35]
Leaf and stem pubescence	Guazuncho 2 and VH8-4602^*	[63]
Fiber quality	Guazuncho 2 and VH8^*	[64]
Lint percentage and fiber quality traits	Yumian 1 and T586	[65]
Fiber traits	Handan208 and Pima90^*	[33]
Fiber yield and yield components	Handan 208 and Pima 90^*	[66]
Fiber quality and yield component	Handan 208 and Pima 90^*	[34]
Fiber traits	7235, TM-1, HS427-10, PD6992 and SM3	[67]
Root-knot nematode resistance gene	M-120 RNR and Pima S-6^*	[68]
Fiber and yield component traits	7235 and TM-1	[69]
Fiber quality and yield components	7235 and TM-1	[70]
Root-knot nematode resistance gene (rkn1)	Acala SJ-2, Acala NemX, and Pima S-7^*	[71]
Root-knot nematode resistance gene (rkn1)	Acala SJ-2 and Acala NemX	[72]
Root-knot nematode resistance gene	Resistant near isoline and susceptible near isoline	[73]
Lint percentage and morphological marker genes	TM-1 and T586	[74]
Fiber-related traits	TM-1 and 3-79^*	[36]
Yield, yield component and fiber quality	Near-isogenicBC5S1 chromosome substitution lines, TM-1	[75]
Plant architecture traits	Zhongmiansuo12 and 8891	[76]
Fiber quality traits	Zhongmiansuo12 and 8891	[77]
Yield and yield-component traits	Zhongmiansuo12 and 8891	[78]

^* Interspecific cross.