Table of Contents
International Journal of Plant Genomics
Volume 2014, Article ID 651912, 7 pages
http://dx.doi.org/10.1155/2014/651912
Research Article

Identification and Validation of Expressed Sequence Tags from Pigeonpea (Cajanus cajan L.) Root

1Vidya Pratishthan’s School of Biotechnology, Vidyanagari, Baramati, Pune 413133, India
2Department of Biotechnology, Gulbarga University, Gulbarga, Karnataka 585106, India
3Institute of Biotechnology, Acharya N. G. Ranga Agricultural University, Hyderabad 500030, India

Received 14 November 2013; Accepted 15 April 2014; Published 6 May 2014

Academic Editor: Søren K. Rasmussen

Copyright © 2014 Ravi Ranjan Kumar et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Linked References

  1. Y. L. Nene and V. K. Shiela, “Pigeon pea: geography and importance,” in The Pigeon Pea, Y. L. Nene, S. H. Hall, and V. K. Sheila, Eds., pp. 1–14, CAB International, Wellingford, UK, 1990. View at Google Scholar
  2. M. T. Kassa, R. V. Penmetsa, N. Carrasquilla-Garcia et al., “Genetic patterns of domestication in pigeonpea (Cajanus cajan (L.) Millsp.) and wild Cajanus relatives,” PLoS ONE, vol. 7, no. 6, Article ID e39563, 2012. View at Publisher · View at Google Scholar
  3. R. K. Varshney, R. V. Penmetsa, S. Dutta et al., “Pigeonpea genomics initiative (PGI): an international effort to improve crop productivity of pigeonpea (Cajanus cajan L.),” Molecular Breeding, vol. 26, no. 3, pp. 393–408, 2010. View at Publisher · View at Google Scholar · View at Scopus
  4. N. L. Raju, B. N. Gnanesh, P. Lekha et al., “The first set of EST resource for gene discovery and marker development in pigeonpea (Cajanus cajan L.),” BMC Plant Biology, vol. 10, pp. 45–51, 2010. View at Publisher · View at Google Scholar · View at Scopus
  5. S. F. Altschul, T. L. Madden, A. A. Schäffer et al., “Gapped BLAST and PSI-BLAST: a new generation of protein database search programs,” Nucleic Acids Research, vol. 25, no. 17, pp. 3389–3402, 1997. View at Publisher · View at Google Scholar · View at Scopus
  6. R. Zhai, Y. Feng, H. Wang et al., “Transcriptome analysis of rice root heterosis by RNA-Seq,” BMC Genomics, vol. 14, article 19, pp. 1–14, 2013. View at Publisher · View at Google Scholar
  7. Y. Jiang and M. K. Deyholos, “Comprehensive transcriptional profiling of NaCl-stressed Arabidopsis roots reveals novel classes of responsive genes,” BMC Plant Biology, vol. 6, article 25, 2006. View at Publisher · View at Google Scholar · View at Scopus
  8. A. M. Lindroth, P. Saarikoski, G. Flygh et al., “Two S-adenosylmethionine synthetase-encoding genes differentially expressed during adventitious root development in Pinus contorta,” Plant Molecular Biology, vol. 46, no. 3, pp. 335–346, 2001. View at Publisher · View at Google Scholar · View at Scopus
  9. P. K. Chiang, R. K. Gordon, J. Tal et al., “S-adenosylmethionine and methylation,” The FASEB Journal, vol. 10, no. 4, pp. 471–480, 1996. View at Google Scholar · View at Scopus
  10. A. M. Shirley, C. M. McMichael, and C. Chapple, “The sng2 mutant of Arabidopsis is defective in the gene encoding the serine carboxypeptidase-like protein sinapoylglucose:choline sinapoyltransferase,” Plant Journal, vol. 28, no. 1, pp. 83–94, 2001. View at Publisher · View at Google Scholar · View at Scopus
  11. C. M. Fraser, M. G. Thompson, A. M. Shirley et al., “Related Arabidopsis serine carboxypeptidase-like sinapoylglucose acyltransferases display distinct but overlapping substrate specificities,” Plant Physiology, vol. 144, no. 4, pp. 1986–1999, 2007. View at Publisher · View at Google Scholar · View at Scopus
  12. D. Weier, J. Mittasch, D. Strack, and C. Milkowski, “The genes BnSCT1 and BnSCT2 from Brassica napus encoding the final enzyme of sinapine biosynthesis: molecular characterization and suppression,” Planta, vol. 227, no. 2, pp. 375–385, 2008. View at Publisher · View at Google Scholar · View at Scopus
  13. W. T. Lowther and B. W. Matthews, “Structure and function of the methionine aminopeptidases,” Biochimica et Biophysica Acta, vol. 1477, no. 1-2, pp. 157–167, 2000. View at Publisher · View at Google Scholar · View at Scopus
  14. V. S. Reddy, G. S. Ali, and A. S. N. Reddy, “Genes encoding calmodulin-binding proteins in the Arabidopsis genome,” Journal of Biological Chemistry, vol. 277, no. 12, pp. 9840–9852, 2002. View at Publisher · View at Google Scholar · View at Scopus
  15. S. R. Albright and R. Tjian, “TAFs revisited: more data reveal new twists and confirm old ideas,” Gene, vol. 242, no. 1-2, pp. 1–13, 2000. View at Publisher · View at Google Scholar · View at Scopus
  16. J. Kang, J. Park, H. Choi et al., “Plant ABC transporters,” The Arabidopsis Book, vol. 9, pp. 1–25, 2010. View at Publisher · View at Google Scholar
  17. K. A. Devor and J. B. Mudd, “Structural analysis of phosphatidylcholine of plant tissue,” Journal of Lipid Research, vol. 12, no. 4, pp. 396–402, 1971. View at Google Scholar · View at Scopus