Research Article

The Conformation and Assignment of the Proton NMR Spectrum in Water of DX600, a Bioactive Peptide with a Random Coil Conformation

Table 5

rOe distance constraints on the structure of DX600.

AcAc Me/Gly1 NH, 4.0 Å

Gly1Gly1αH/Asp2 NH, 4.0 Å
Asp2Asp2αH/Tyr3 NH, 3.0 Å; Asp2βH/Tyr3 2,6H, 7.4 Å; Asp2αH/Tyr3 3,5H, 6.4 Å
Tyr3Tyr3αH/Tyr3 3,5H, 6.4 Å; Tyr3βH/Tyr3 3,5H, 7.4 Å; Tyr3 NH/Ser4 NH, 4 Å
Tyr3αH/Ser4 NH, 4 Å
Ser4Ser4 NH/His5 NH 4 Å; Ser4βH/His5 NH, 5 Å
His5His5αH/His5 4H, 4 Å; His5βH(both)/His5 4H, 4 Å; His5βH/Cys6βH, 5 Å
Cys6Cys6 NH/Ser7 NH, 4 Å; Cys6αH/Ser7βH, 5 Å
Pro8Pro8αH/Leu9 NH, 3 Å
Leu9Leu9δH(both)/Tyr11 3,5H, 7.4 Å
Arg10Arg10αH/Tyr11 NH, 3 Å; Arg10βH/ Tyr11 2,6H, 7.4 Å
Tyr11Tyr11αH/Tyr12 NH, 3 Å; Tyr11βH(both)/Tyr12 2,6H, 6.4 Å
Tyr12Tyr12βH(both)/Tyr12 2,6H 5.4 Å
Trp14Trp14αH/Trp14 4H 4 Å; Trp14βH/Trp14 4H, 5 Å; Trp14βH/Trp15 2H, 5 Å
Trp15Trp15αH/Trp15 4H, 4 Å; Trp15βH/Trp15 4H 4 Å; Trp15αH/Lys16 NH, 3 Å
Lys16Lys16αH/Cys17 NH, 3 Å
Cys17Cys17αH/Thr18 NH, 4 Å
Thr18Thr18 NH/Tyr19 NH, 4 Å
Tyr19Tyr19βH/Tyr19 2,6H, 7.4 Å; Tyr19 2,6H/Pro20αH 6.4 Å
Tyr19αH/Asp21 NH, 6.4 Å; Tyr19 2,6H/Asp21 NH 6.4 Å
Asp21Asp21αH/Pro22αH, 4 Å; Asp21αH/Pro22βH, 4 Å
Pro22Pro22αH/Glu23βH, 5 Å; Pro22βH/Glu23βH, 6 Å
Glu23Glu23αH/Gly24 NH, 3 Å
Gly24Gly24αH/Gly25 NH, 4 Å

If the constraint is in bold, a pseudoatom correction [13] is applied.