Research Article
Genetic Diversity of Colletotrichum spp. an Endophytic Fungi in a Medicinal Plant, Brazilian Pepper Tree
Table 1
Identification of Colletotrichum using primers taxon-specific CaInt-ITS4, CgInt-ITS4 and Col-ITS4.
| | Species | Strain number | PCR identification | ITS | | CaInt-ITS4 | CgInt-ITS4 | Col-ITS4 |
| | C. boninense | LGMF625 | − | − | − | C. boninense | | LGMF666 | − | − | + | na | | C. acutatum | LGMF738 | + | − | − | C. acutatum | | C. gloeosporioides | LGMF621 | − | + | − | na | | LGMF622 | − | + | − | C. gloeosporioides | | LGMF623 | − | + | − | C. gloeosporioides | | LGMF626 | − | + | − | C. gloeosporioides | | LGMF627 | − | + | − | C. gloeosporioides | | LGMF633* | − | + | − | na | | LGMF638 | − | + | − | na | | LGMF667 | − | - | − | C. gloeosporioides | | LGMF669 | − | + | − | na | | LGMF672 | − | + | − | C. gloeosporioides | | LGMF678 | − | + | − | na | | LGMF680 | − | + | − | C. gloeosporioides | | LGMF682 | − | + | − | na | | LGMF686 | − | + | − | na | | LGMF687 | − | + | − | C. gloeosporioides | | LGMF688 | − | + | − | C. gloeosporioides | | LGMF689 | − | + | − | C. gloeosporioides | | LGMF721 | − | + | − | C. gloeosporioides | | LGMF722 | − | + | − | C. gloeosporioides | | LGMF723 | − | + | − | C. gloeosporioides | | LGMF726* | − | + | − | na | | LGMF727 | − | + | − | C. gloeosporioides | | LGMF728 | − | + | − | C. gloeosporioides | | LGMF729* | − | + | − | na | | LGMF730 | − | + | − | na | | LGMF731 | − | + | − | C. gloeosporioides | | LGMF732 | − | + | − | C. gloeosporioides | | LGMF733 | − | + | − | na | | LGMF734 | − | + | − | C. gloeosporioides | | LGMF735 | − | + | − | C. gloeosporioides | | LGMF736 | − | + | − | C. gloeosporioides | | LGMF740 | − | + | − | na | | LGMF741 | − | + | − | C. gloeosporioides | | LGMF742 | − | + | − | C. gloeosporioides | | LGMF743 | − | + | − | na | | LGMF744 | − | + | − | C. gloeosporioides |
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(*) dsRNA confirmed after analysis digestion with RNAse, DNAse, and S1 Nuclease. na: not available.
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