Research Article
HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction
Table 2
Reconstruction rate and running time of HapCUT and HMEC with 5% coverage on HuRef data.
| Error rate | HapCUT | HMEC | Reconstruction rate | Time (sec) | Reconstruction rate | Time (sec) |
| 10 | 0.986 | 40.582 | 0.859 | 0.119 | 15 | 0.913 | 38.282 | 0.889 | 0.125 | 20 | 0.875 | 46.324 | 0.811 | 0.129 | 25 | 0.902 | 47.101 | 0.827 | 0.130 | 30 | 0.840 | 39.196 | 0.802 | 0.125 | 40 | 0.694 | 44.792 | 0.665 | 0.129 |
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