Research Article

HMEC: A Heuristic Algorithm for Individual Haplotyping with Minimum Error Correction

Table 6

Reconstruction rate and running time of HapCUT and HMEC for ReHap samples.

Error rate HapCUT HMEC
Reconstruction rate Time (sec)Reconstruction rate Time (sec)

0.2 0.870 20.343 0.985 0.035
0.3 0.865 21.109 0.970 0.030
0.4 0.840 20.106 0.945 0.035
0.5 0.790 19.549 0.865 0.050