Research Article

Cystathionine β-Lyase-Like Protein with Pyridoxal Binding Domain Characterized in Leishmania major by Comparative Sequence Analysis and Homology Modelling

Table 2

Most frequent conserved interactions observed in PLP binding domain.

Conserved amino acidInteractionFrequency**

Gly71OP2, OP3Mild
Met72OP1Less
Tyr95π-π stacking, arene-cation interaction, OP1, OP2High
Asp159N–HHigh
Ser191OP1, OP2, OP3High
Lys194–CHO, OP1, OP2, OP3High

On the basis of the number of times the conserved residue was found in a docking pose out of 100 poses. Less: not more than 15 times; mild: not more than 30 times; high: not less than 50%, that is, out of 100 docking poses minimum, we get this interaction50 times.