Research Article

Conservation of the Nuclear Receptor Response Element in HIV-1 LTRs: A Possible PPAR Response Element?

Table 2

The consensus sequences of the NRRE-1-DE found in the 5′-LTRs of the HIV-1 isolates, compared to the published sequence [5] and the consensus from the cellular metabolism genes [15]. The spacer nucleotide between the half-sites is shown in boldface text.

HIV-1 5′ LTRsNRRE-1-DE sequences (5′–3′)

France T
USA T a/gTGG
Tanzania T Ga/gTGG
India T g/aTGG
Consensus T Ga/gTGG
Published sequence T
Cellular consensus t / a