Table of Contents
ISRN Molecular Biology
Volume 2013, Article ID 930216, 10 pages
http://dx.doi.org/10.1155/2013/930216
Research Article

Characterization of Histone H2A Derived Antimicrobial Peptides, Harriottins, from Sicklefin Chimaera Neoharriotta pinnata (Schnakenbeck, 1931) and Its Evolutionary Divergence with respect to CO1 and Histone H2A

1Department of Marine Biology, Microbiology and Biochemistry, School of Marine Sciences, Cochin University of Science and Technology, Fine Arts Avenue, Kochi 682016, Kerala, India
2Centre for Marine Living Resources and Ecology, Kakkanad, Kochi 682037, Kerala, India
3National Centre for Aquatic Animal Health (NCAAH), CUSAT, Fine Arts Avenue, Kochi 682016, Kerala, India

Received 18 April 2013; Accepted 8 May 2013

Academic Editors: M. Greenwood and H.-C. Lee

Copyright © 2013 Naveen Sathyan et al. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

Linked References

  1. P. Bulet, C. Hetru, J. Dimarcq, and D. Hoffmann, “Antimicrobial peptides in insects; structure and function,” Developmental and Comparative Immunology, vol. 23, no. 4-5, pp. 329–344, 1999. View at Publisher · View at Google Scholar · View at Scopus
  2. Z. Jiang, A. I. Vasil, J. D. Hale, R. E. W. Hancock, M. L. Vasil, and R. S. Hodges, “Effects of net charge and the number of positively charged residues on the biological activity of amphipathic α-helical cationic antimicrobial peptides,” Biopolymers, vol. 90, no. 3, pp. 369–383, 2008. View at Publisher · View at Google Scholar · View at Scopus
  3. A. E. Ellis, “Non-specific defense mechanisms in fish and their role in disease processes,” Developments in Biological Standardization, vol. 49, pp. 337–352, 1974. View at Google Scholar · View at Scopus
  4. M. J. Manning, “Immune defence systems,” in Biology of Farmed Fish, K. D. Blanck and A. D. Pickering, Eds., pp. 180–221, Sheffield Academic Press, Sheffield, UK, 1998. View at Google Scholar
  5. J. E. Bly and L. W. Clem, “Temperature-mediated processes in teleost immunity: in vitro immunosuppression induced by in vivo low temperature in channel catfish,” Veterinary Immunology and Immunopathology, vol. 28, no. 3-4, pp. 365–377, 1991. View at Google Scholar · View at Scopus
  6. H. Kawasaki and S. Iwamuro, “Potential roles of histones in host defense as antimicrobial agents,” Infectious Disorders, vol. 8, no. 3, pp. 195–205, 2008. View at Google Scholar · View at Scopus
  7. C. Li, L. Song, J. Zhao et al., “Preliminary study on a potential antibacterial peptide derived from histone H2A in hemocytes of scallop Chlamys farreri,” Fish and Shellfish Immunology, vol. 22, no. 6, pp. 663–672, 2007. View at Publisher · View at Google Scholar · View at Scopus
  8. I. Y. Park, C. B. Park, M. S. Kim, and S. C. Kim, “Parasin I, an antimicrobial peptide derived from histone H2A in the catfish, Parasilurus asotus,” FEBS Letters, vol. 437, no. 3, pp. 258–262, 1998. View at Publisher · View at Google Scholar · View at Scopus
  9. R. C. Richards, D. B. O'Neil, P. Thibault, and K. V. Ewart, “Histone H1: an antimicrobial protein of Atlantic salmon (Salmo salar),” Biochemical and Biophysical Research Communications, vol. 284, no. 3, pp. 549–555, 2001. View at Publisher · View at Google Scholar · View at Scopus
  10. G. A. Birkemo, T. Lüders, Ø. Andersen, I. F. Nes, and J. N. Meyer, “Hipposin, a histone-derived antimicrobial peptide in Atlantic halibut (Hippoglossus hippoglossus L.),” Biochimica et Biophysica Acta, vol. 1646, no. 1-2, pp. 207–215, 2003. View at Publisher · View at Google Scholar · View at Scopus
  11. J. M. O. Fernandes, G. D. Kemp, G. M. Molle, and V. J. Smith, “Anti-microbial properties of histone H2A from skin secretions of rainbow trout, Oncorhynchus mykiss,” Biochemical Journal, vol. 368, no. 2, pp. 611–620, 2002. View at Publisher · View at Google Scholar · View at Scopus
  12. N. Sathyan, R. Philip, E. R. Chaithanya, P. R. A. Kumar, and S. P. Antony, “Identification of a histone derived, putative antimicrobial peptide Himanturin from round whip ray Himantura pastinacoides and its phylogenetic significance,” Results in Immunology, vol. 2, pp. 120–124, 2012. View at Publisher · View at Google Scholar
  13. E. R. Chaithanya, R. Philip, N. Sathyan, and P. R. A. Kumar, “Molecular characterization and phylogenetic analysis of a histone-derived antimicrobial peptide teleostin from the marine teleost fishes, Tachysurus jella and Cynoglossus semifasciatus,” ISRN Molecular Biology, vol. 2013, Article ID 185807, 7 pages, 2013. View at Publisher · View at Google Scholar
  14. S. A. Patat, R. B. Carnegie, C. Kingsbury et al., “Antimicrobial activity of histones from hemocytes of the Pacific white shrimp,” European Journal of Biochemistry, vol. 271, no. 23-24, pp. 4825–4833, 2004. View at Publisher · View at Google Scholar · View at Scopus
  15. N. Sathyan, R. Philip, E. R. Chaithanya, P. R. A. Kumar, S. P. Antony, and I. S. B. Singh, “Identification of a histone derived, putative antimicrobial peptide sunettin from marine clam Sunetta scripta,” Blue Biotechnology Journal, vol. 1, no. 3, pp. 397–403, 2012. View at Google Scholar
  16. N. Sathyan, R. Philip, E. R. Chaithanya, and P. R. A. Kumar, “Identification and molecular characterization of molluskin, a histone-H2A-derived antimicrobial peptide from molluscs,” ISRN Molecular Biology, vol. 2012, Article ID 219656, 6 pages, 2012. View at Publisher · View at Google Scholar
  17. O. Folmer, M. Black, W. Hoeh, R. Lutz, and R. Vrijenhoek, “DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates,” Molecular Marine Biology and Biotechnology, vol. 3, no. 5, pp. 294–299, 1994. View at Google Scholar · View at Scopus
  18. N. Guex and M. C. Peitsch, “SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling,” Electrophoresis, vol. 18, no. 15, pp. 2714–2723, 1997. View at Publisher · View at Google Scholar · View at Scopus
  19. T. Schwede, J. Kopp, N. Guex, and M. C. Peitsch, “SWISS-MODEL: an automated protein homology-modeling server,” Nucleic Acids Research, vol. 31, no. 13, pp. 3381–3385, 2003. View at Publisher · View at Google Scholar · View at Scopus
  20. K. Arnold, L. Bordoli, J. Kopp, and T. Schwede, “The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling,” Bioinformatics, vol. 22, no. 2, pp. 195–201, 2006. View at Publisher · View at Google Scholar · View at Scopus
  21. H. S. Kim, H. Yoon, I. Minn et al., “Pepsin-mediated processing of the cytoplasmic histone H2A to strong antimicrobial peptide buforin I,” The Journal of Immunology, vol. 165, no. 6, pp. 3268–3274, 2000. View at Google Scholar · View at Scopus
  22. J. H. Cho, I. Y. Park, H. S. Kim, W. T. Lee, M. S. Kim, and S. C. Kim, “Cathepsin D produces antimicrobial peptide parasin I from histone H2A in the skin mucosa of fish,” The FASEB Journal, vol. 16, no. 3, pp. 429–431, 2002. View at Google Scholar · View at Scopus
  23. C. B. Park, M. S. Kim, and S. C. Kim, “A novel antimicrobial peptide from Bufo bufo gargarizans,” Biochemical and Biophysical Research Communications, vol. 218, no. 1, pp. 408–413, 1996. View at Publisher · View at Google Scholar · View at Scopus
  24. J. H. Cho, B. H. Sung, and S. C. Kim, “Buforins: histone H2A-derived antimicrobial peptides from toad stomach,” Biochimica et Biophysica Acta, vol. 1788, no. 8, pp. 1564–1569, 2009. View at Publisher · View at Google Scholar · View at Scopus
  25. S. Kobayashi, K. Takeshima, C. B. Park, S. C. Kim, and K. Matsuzaki, “Interactions of the novel anfimicrobial peptide buforin 2 with lipid bilayers: proline as a translocation promoting factor,” Biochemistry, vol. 39, no. 29, pp. 8648–8654, 2000. View at Publisher · View at Google Scholar · View at Scopus
  26. C. B. Park, K. S. Yi, K. Matsuzaki, M. S. Kim, and S. C. Kim, “Structure-activity analysis of buforin II, a histone H2A-derived antimicrobial peptide: the proline hinge is responsible for the cell-penetrating ability of buforin II,” Proceedings of the National Academy of Sciences of the United States of America, vol. 97, no. 15, pp. 8245–8250, 2000. View at Publisher · View at Google Scholar · View at Scopus
  27. E. T. Uyterhoeven, C. H. Butler, D. Ko, and D. E. Elmore, “Investigating the nucleic acid interactions and antimicrobial mechanism of buforin II,” FEBS Letters, vol. 582, no. 12, pp. 1715–1718, 2008. View at Publisher · View at Google Scholar · View at Scopus
  28. G. S. Yi, C. B. Park, S. C. Kim, and C. Cheong, “Solution structure of an antimicrobial peptide buforin II,” FEBS Letters, vol. 398, no. 1, pp. 87–90, 1996. View at Publisher · View at Google Scholar · View at Scopus
  29. D. W. Hoskin and A. Ramamoorthy, “Studies on anticancer activities of antimicrobial peptides,” Biochimica et Biophysica Acta, vol. 1778, no. 2, pp. 357–375, 2008. View at Publisher · View at Google Scholar · View at Scopus
  30. H. S. Lee, C. B. Park, J. M. Kim et al., “Mechanism of anticancer activity of buforin IIb, a histone H2A-derived peptide,” Cancer Letters, vol. 271, no. 1, pp. 47–55, 2008. View at Publisher · View at Google Scholar · View at Scopus
  31. K. Takeshima, A. Chikushi, K. K. Lee, S. Yonehara, and K. Matsuzaki, “Translocation of analogues of the antimicrobial peptides magainin and buforin across human cell membranes,” The Journal of Biological Chemistry, vol. 278, no. 2, pp. 1310–1315, 2003. View at Publisher · View at Google Scholar · View at Scopus