Research Article
Gene Expression Analysis of the IPEC-J2 Cell Line: A Simple Model for the Inflammation-Sensitive Preterm Intestine
Table 1
Gene symbol, forward and reverse primer sequences, and amplicon length.
| Gene symbol | Sequence (5′-3′) |
Amplicon length |
| ACTB | F: CTACGTCGCCCTGGACTTC | 76 | R: GCAGCTCGTAGCTCTTCTCC | ALPI | F: TCCCAGACATACAACGTGGA | 90 | R: GGTCTGGTAGTTGGCCTTGA | AOAH | F: GTAATGGCATTTGGGGTGTC | 97 | R: TCTCCCAGCAAAATGATTCC | APOA1 | F: GTTCTGGGACAACCTGGAAA | 86 | R: GCTGCACCTTCTTCTTCACC | CCL2 | F: GCAAGTGTCCTAAAGAAGCAGTG | 103 | R: TCCAGGTGGCTTATGGAGTC | CCL3 | F: CCAGGTCTTCTCTGCACCAC | 90 | R: GCTACGAATTTGCGAGGAAG | CCL5 | F: CTCCATGGCAGCAGTCGT | 121 | R: AAGGCTTCCTCCATCCTAGC | CD14 | F: GGGTTCCTGCTCAGATTCTG | 164 | R: CCCACGACACATTACGGAGT | CD40 | F: TGAGAGCCCTGGTGGTTATC | 90 | R: GCTCCTTGGTCACCTTTCTG | CD163 | F: CACATGTGCCAACAAAATAAGAC | 130 | R: CACCACCTGAGCATCTTCAA | CD200 | F: TCCCCAGGAAGTTTTGATTG | 84 | R: CCATGGTTCTTGCTGAAGGT | CLDN3 | F: ATCGGCAGCAGCATTATCAC | 94 | R: ACACTTTGCACTGCATCTGG | CRP | F: GGTGGGAGACATTGGAGATG | 85 | R: GAAGGTCCCACCAGCATAGA | CXCL10 | F: CCCACATGTTGAGATCATTGC | 141 | R: GCTTCTCTCTGTGTTCGAGGA | C3 | F: ATCAAATCAGGCTCCGATGA | 76 | R: GGGCTTCTCTGCATTTGATG | DEFB1 | F: ACCTGTGCCAGGTCTACTAAAAA | 109 | R: GGTGCCGATCTGTTTCATCT | DEFB4A | F: CAGGATTGAAGGGACCTGTT | 99 | R: CTTCACTTGGCCTGTGTGTC | FGG | F: GAATTTTGGCTGGGAAATGA | 86 | R: CAGTCCTCCAGCTGCACTCT | HP | F: ACAGATGCCACAGATGACAGC | 105 | R: CGTGCGCAGTTTGTAGTAGG | HPRT1 | F: ACACTGGCAAAACAATGCAA | 71 | R: TGCAACCTTGACCATCTTTG | IL1B | F: CCAAAGAGGGACATGGAGAA | 123 | R: GGGCTTTTGTTCTGCTTGAG | IL1RN | F: TGCCTGTCCTGTGTCAAGTC | 90 | R: GTCCTGCTCGCTGTTCTTTC | IL6 | F: TGGGTTCAATCAGGAGACCT | 116 | R: CAGCCTCGACATTTCCCTTA | IL8 | F: TTGCCAGAGAAATCACAGGA | 78 | R: TGCATGGGACACTGGAAATA | IL10 | F: CTGCCTCCCACTTTCTCTTG | 95 | R: TCAAAGGGGCTCCCTAGTTT | IL18 | F: CTGCTGAACCGGAAGACAAT | 100 | R: TCCGATTCCAGGTCTTCATC | IFNG | F: CCATTCAAAGGAGCATGGAT | 76 | R: TTCAGTTTCCCAGAGCTACCA | ITIH41 | F: ATGACAGCAAGCGAACAGTG | 85 | R: GGGGATCCCTCTTGGTAATC | ITIH42 | F: AGGCCCTCACCATATCACAG | 110 | R: GTTGCCATCCAGGACTGTTT | LBP | F: CCCAAGGTCAATGATAAGTTGG | 83 | R: ATCTGGAGAACAGGGTCGTG | LCT | F: CACTCAAAGCTGTGCAGGAC | 144 | R: GGATCCTTGGCAGAGAAGTG | MUC1 | F: GGATTTCTGAATTGTTTTTGCAG | 116 | R: ACTGTCTTGGAAGGCCAGAA | MUC2 | F: GCACGTCTGCAACAAGGAC | 125 | R: CAAAGCCCTCCAGGCAGT | NFKBIA | F: GAGGATGAGCTGCCCTATGAC | 85 | R: CCATGGTCTTTTAGACACTTTCC | NFKB1 | F: CTCGCACAAGGAGACATGAA | 97 | R: GGGTAGCCCAGTTTTTGTCA | OCLN | F: CGGTGAGAAGATTGGCTGAT | 100 | R: TTTCAAAAGGCCTGGATGAC | PAFAH1B1 | F: GCAAACTGGCTACTGTGTGAAG | 113 | R: GCACAGTCTGGTCATTGGAA | PTGS2 | F: AGGCTGATACTGATAGGAGAAACG | 100 | R: GCAGCTCTGGGTCAAACTTC | RPL13A | F: ATTGTGGCCAAGCAGGTACT | 76 | R: AATTGCCAGAAATGTTGATGC | SAA | F: TAAAGTGATCAGCAATGCCAAA | 96 | R: TCAACCCTTGAGTCCTCCAC | SFTPA1 | F: CATGGGTGTCCTCAGTTTCC | 86 | R: CATCAAAAGCGACTGACTGC | SLC5A1 | F: CTGCAAGAGAGTCAATGAGGAG | 99 | R: CCGGTTCCATAGGCAAACT | TF | F: CTCAACCTCAAAACTCCTGGAA | 82 | R: CCGTCTCCATCAGGTGGTA | TGFB1 | F: GCAAGGTCCTGGCTCTGTA | 97 | R: TAGTACACGATGGGCAGTGG | TLR2 | F: GTTTTACGGAAATTGTGAAACTG | 136 | R: TCCACATTACCGAGGGATTT | TLR4 | F: TTTCCACAAAAGTCGGAAGG | 145 | R: CAACTTCTGCAGGACGATGA | TNF | F: CCCCCAGAAGGAAGAGTTTC | 92 | R: CGGGCTTATCTGAGGTTTGA | TNFAIP3 | F: CCCAGCTTTCTCTCATGGAC | 113 | R: TTGGTTCTTCTGCCGTCTCT |
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