Review Article

How Can Microarrays Unlock Asthma?

Table 1

Databases used in Affymetrix microarray annotation.

DatabaseDescription WebsiteReferences

Expressed Sequence Tag Database (dbEST)Division of GenBank that contains “single-pass" cDNA sequences (only sequenced once), or “Expressed Sequence Tags"http://www.ncbi.nlm.nih.gov/dbEST/[78]
The Institute for Genomic Research (TIGR)Constructed by clustering, then assembling expressed sequence tag (EST) and annotated gene sequences from GenBankhttp://compbio.dfci.harvard.edu/tgi/[79]
UniGene BuildContains transcript sequence information including: protein similarities, gene expression, cDNA clone reagents, and genomic locationhttp://www.ncbi.nlm.nih.gov/unigene/[80]
GenBankAnnotated collection of all publicly available DNA sequenceshttp://www.ncbi.nlm.nih.gov/genbank/[81]
The Reference Sequence (RefSeq)Contains nonredundant, and well-annotated genomic DNA, transcripts, and protein sequenceshttp://www.ncbi.nlm.nih.gov/RefSeq/[82]