DNA Based Identification and Phylogenetic Characterisation of Endophytic and Saprobic Fungi from Antidesma madagascariense, a Medicinal Plant in Mauritius

Table 1

Fungal isolates recovered from leaves samples of Antidesma madagascariense and the length of their ITS sequences.

	GenBank accession numbers	Query coverage (%)	Max. identity (%)
Endophytes and their similar sequences from Genbank based on blast search
Endophyte R1: length 458 nucleotides
Fusarium oxysporum strain FuO139	KC196121	100	100
Fusarium oxysporum f. sp. ciceris isolate Foc-82108	KC478162	100	100
Endophyte R2: length 456 nucleotides
Pestalotiopsis microspora isolate HF12440	JQ863222	100	100
Pestalotiopsis mangiferae strain E1392	JX997752	99	100
Endophyte R3: length 483 nucleotides
Fusarium oxysporum CMT6	JQ754006	100	100
Fusarium oxysporum cepae	HQ658969	100	100
Endophyte R6: length 491 nucleotides
Neofusicoccum parvum isolate Lanmei4-14	JX096635	100	99
Neofusicoccum parvum isolate Lijiang23	JX096633	100	99
Endophyte R7: length 508 nucleotides
Guignardia sp. CYP7	KC145173	100	100
Guignardia mangiferae strain ZJUCC200999	JN791608	100	100
Endophyte R9: length 542 nucleotides
Cyphomyrmex muelleri fungal symbiont NJM-2012	JQ617621	100	99
Acremonium polychromum strain: T6713-22-1a	AB540547	100	99
Endophyte R11: length 526 nucleotides
Cyphomyrmex muelleri fungal symbiont	JQ617621	100	99
Acremonium polychromum collection UTHSC:08-1028	FN706548	100	99
Endophyte R20: length 524 nucleotides
Fusarium oxysporum	JF776163	99	100
Fusarium oxysporum cucumerinum ATCC 16416	DQ452450	99	100
Endophyte R21: length 561 nucleotides
Guignardia sp. SEGA49	JN607105	100	100
Guignardia mangiferae strain ZJUCC200999	JN791608	100	100
Endophyte R22: length 491 nucleotides
Fusarium oxysporum strain DB0612101	HQ682196	100	100
Fusarium sp. EMA-2011	JF429684	100	99
Endophyte R25: length 569 nucleotides
Fungal sp. ARIZ B089	FJ612909	100	99
Trichoderma sp.	AY514867	100	99
Endophyte R26: length 484 nucleotides
Fungal endophyte strain MX482	JX155942	100	99
Penicillium westlingii	AF033423	100	99
Endophyte R28: length 312 nucleotides
Penicillium sp.	HQ316567	100	98
Penicillium griseofulvum	HE805121	99	98
Saprophytes
Saprophyte S1: length 508 nucleotides
Trichoderma koningiopsis isolate UFSM-Tr1s	KC155356	100	100
Trichoderma gamsii strain CS11784	JX406518	100	100
Saprophyte S2: length 553 nucleotides
Hypocrea lixii isolate B1a0034EM2CC39	JQ411358	100	99
Fungal endophyte strain MS429	JX155901	100	99
Saprophyte S3: length 537 nucleotides
Trichoderma koningiopsis strain PROF4	JX069202	100	99
Trichoderma gamsii strain CQBN3005	JQ040342	100	99
Saprophyte S4: length nucleotides
Aspergillus versicolor strain dl-29	JX401544	100	99
Aspergillus versicolor culture-collection UOA/HCPFGRC	KC253963	100	99
Saprophyte S8: length 538 nucleotides
Trichoderma gamsii strain TU Graz 8TSM5	EU871026	100	99
Trichoderma koningiopsis strain NAN11	JX069207	100	99
Saprophyte S9: length 566 nucleotides
Aspergillus niger strain E-000535890	JN545800	99	99
Aspergillus niger strain KAML02	KC119204	99	99
Saprophyte S10A: length 543 nucleotides
Hypocrea lixii strain BRFM 1285	JX082390	100	99
Hypocrea lixii isolate B1a0034EM2CC39	JQ411358	100	99
Saprophyte S10B: length 555 nucleotides
Trichoderma album strain APT08	JF304318	99	99
Fungal endophyte strain MS153	JX155866	99	99
Saprophyte S11: length 545 nucleotides
Trichoderma koningiopsis	JX238474	99	99
Trichoderma koningiopsis strain SHSJ8001	JQ040369	99	99
Saprophyte S15: length 605 nucleotides
Hypocrea lixii isolate PCO.89	HQ248196	100	99
Hypocrea lixii strain Tri102	HQ229942	100	99
Saprophyte S17: length 506 nucleotides
Fusarium sp. VegaE3-61	EF687913	98	98
Fusarium sp. IBL 031571	DQ682580	99	99
Saprophyte S19: length 575 nucleotides
Fungal endophyte strain MS429	JX155901	98	99
Fungal sp. ARIZ B426	FJ613029	98	99