Journal of Nucleic Acids / 2010 / Article / Tab 1 / Research Article
Rev1, Rev3, or Rev7 siRNA Abolishes Ultraviolet Light-Induced Translesion Replication in HeLa Cells: A Comprehensive Study Using Alkaline Sucrose Density Gradient Sedimentation siRNA Sense strand
(
a
)
,
(
b
)
Antisense strand
(
a
)
,
(
b
)
Prevention of UV-TLS (result) siRev3-A gcuuuacaugagauacaaaTT uuuguaucucauguaaagcTT significant siRev3-B gacaguuuucagucaagauTT aucuugacugaaaacugucTT significant siRev3-C gagguaugauccugauauuTT aauaucaggaucauaccucTT significant siRev3-D guauugacuuaugucggauTT auccgacauaagucaauacTT significant siRev3cont-A (6nt mismatches) ggu uugag ua auguac gauTT aucgu acauu ac ucaaac cTT no effect siRev3cont-B (4nt mismatches) gg auugag uuauguac gauTT aucgu acauaac ucaauc cTT no effect siRev3cont-C (2nt mismatches) guauugag uuaugucc gauTT aucg gacauaac ucaauacTT no effect siRev7-A gauccaggucaucaaggauTT auccuugaugaccuggaucTT partial siRev7-B gaugcagcuuuacguggaaTT uuccacguaaagcugcaucTT significant siRev7-C cacugucugucucaaauacTT guauuugagacagacagugTT significant siRev7cont-A gaugcagg uuuacguc gaaTT uucg acguaaac cugcaucTT no effect siRev1-A siRev1-B siRev1-C siRev1-D siRev1cont-E cacauauuauugccacaaaTT gaagauugaaacggaaaauTT ccuucagacugcaauuuuaTT gugugaauugacugaguuuTT ccuucac acc gcaacg uuaTT uuuguggcaauaauaugugTT auuuuccguuucaaucuucTT uaaaauugcagucugaaggTT aaacucagucaauucacacTT uaacg uugcg gug ugaaggTT significant significant significant significant little to no effect siPol
𝜂
-4 siPol
𝜂
-A siPol
𝜂
-B siPol
𝜂
cont-A uaaaccuugugcaguuguaTT gaaguuauguccagaucuuTT gcuucgcuuucaucucuuaTT uaaaccug gugcaguc guaTT uacaacugcacaagguuuaTT aagaucuggacauaacuucTT uaagagaugaaagcgaagcTT uacg acugcacc agguuuaTT partial significant significant no effect siPol
𝜄
-A siPol
𝜄
-5 gccucauacagugagauuaTT aaguguccacaguugguauTT uaaucucacuguaugaggcTT auaccaacuguggacacuuTT no effect no effect siPol
𝜅
-A siPol
𝜅
-B siPol
𝜅
-C siPol
𝜅
cont-B gagaaaauuaacaaaauuaTT gaauaaaccaaauggacaaTT cuguuaccauuaaguugaaTT gagaaaag uaacaagc uuaTT uaauuuuguuaauuuucucTT uuguccauuugguuuauucTT uucaacuuaaugguaacagTT uaagc uuguuac uuuucucTT partial partial considerable little to no effect
(
a
)
Small letters mean ribonucleotides, and large letters mean deoxyribonucleotides.
(
b
)
Mismatched bases are illustrated in bold and italic letters.