Population-Sequencing as a Biomarker of Burkholderia mallei and Burkholderia pseudomallei Evolution through Microbial Forensic Analysis

Table 3

SNP calls for Burkholderia pseudomallei on chromosome 1. Progenitors are labeled 0_1 to 0_12. Clones from the 8th passage are labeled 8_𝑥_𝑦 to indicate their respective lineage (𝑥 = 1–12) and the number of clones selected for comparison (𝑦 = 1–6).

Genome position

Reference

0_1

0_2

0_3

0_4

0_5

0_8

0_10

0_11

0_12

8_1_1

8_1_2

8_1_3

8_1_4

8_1_5

8_1_6

8_3_1

8_5_1

8_6_1

8_8_1

8_9_1

8_10_1

8_11_1

8_12_1

27694

C

A

A

30272

G

A

C

198367

C

T

T

A

T

208896

G

C

208898

G

C

208901

G

A

209253

G

A

A

238223

G

A

A

238226

T

A

A

A

238248

G

A

254143

C

260159

C

G

309954

G

C

387701

T

G

417834

C

T

417940

T

A

439654

C

A

A

G

G

468747

G

A

C

C

473445

T

G

502149

T

522021

C

A

535552

G

C

575316

C

A

575340

T

A

636702

T

G

637354

C

A

637366

T

C

C

719754

G

A

748773

T

C

748778

G

A

752001

G

A

755855

G

C

827221

G

A

A

A

830204

C

840516

C

T

846684

C

T

T

856204

G

A

856229

G

T

T

867860

T

G

879922

G

A

908149

C

G

G

918155

G

A

918163

G

A