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| miRNA | Predicted functions or targets |
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Conserved miRNAs between poplar and Arabidopsis [25, 66] | ptr-miR156 | (i) SPB-like (ii) Nitrate transporter |
ptr-miR159 | (i) MYB (ii) Asparagine synthase (iii) (1-4)-b-mannan endohydrolase |
ptr-miR160 | Auxin-responsive factor |
ptr-miR162 | DCL1 |
ptr-miR164 | (i) NAC-domain protein (ii) Protein kinase |
ptr-miR168 | (i) Vesicle coat protein complex COPI (ii) AGO1 |
ptr-miR171 | Scarecrow-like transcription factor |
ptr-miR172 | Homeotic protein APETALA2 |
ptr-miR319 | MYB |
ptr-miR408 | (i) Plastocyanin-like (ii) Early-responsive to dehydration-related protein |
ptr-miR472 | Putative disease resistance protein |
|
Poplar miRNAs [66] | ptr-miR473 | (i) UV-B-resistant protein (UVR8) (ii) GRAS domain-containing protein |
ptr-miR474 | (i) PPR (ii) Protein kinase (iii) Kinesin (iv) Leucine-rich repeat |
ptr-miR475 | PPR |
ptr-miR476 | PPR |
ptr-miR477 | (i) GRAS domain-containing protein (ii) NAC-domain protein (iii) Zinc finger protein |
ptr-miR478 | Organic anion transporter |
ptr-miR480 | Proton-dependent oligopeptide transport family protein |
ptr-miR482 | Putative disease resistance protein |
|
P. taeda miRNAs [67] | pta-miR156 | (i) Peptidyl-tRNA hydrolase-like (ii) SPB-domain protein |
pta-miR159 | (i) MYB (ii) Programmed cell death 6 protein-like |
pta-miR160 | (i) Auxin-responsive factor 10 (ARF10) (ii) Aux/IAA protein |
pta-miR319 | Acyl-ACP thioesterase |
pta-miR946 | Disease resistance protein |
pta-miR947 | (i) Pepsin A (ii) Microtubule-bundling polypeptide (iii) Non-protein-coding genes |
pta-miR948 | (i) Serine/threonine kinase (ii) Pepsin A |
pta-miR950 | (i) Non-protein-coding genes (ii) AMP-binding protein |
pta-miR951 | Non-protein-coding genes |
pta-miR952 | (i) Multidrug resistance-associated protein (ii) Thaumatin-like |
|
Conserved miRNAs found in Pinus densata [70] | pde-miR162 | (i) DCL1 (RNA processing) (ii) Nodal modulator 1-like (carboxypeptidase activity) |
pde-miR166 | Class III HD-Zip protein HDZ33 (DNA binding) |
pde-miR171 | (i) GRAS family transcription factor (DNA binding) (ii) Actin binding protein (actin binding) |
pde-miR482 | Histone deacetylase (histone deacetylation) |
pde-miR2118 | CC-NBS-LRR resistance-like protein (defence response) |
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