|
Symbol | Name | Gene Bank accession number | | Sequence | Annealing temp. (°C) | Number of cycles | Product length (bp) |
|
Rat oligonucleotides |
Col1a1 | Collagen, type I, alpha 1 | NM_053304 | Sense antisense | CCCTCTGTGCCTCAGAAGAACT GCCAGTCTGTTGGTCCATGTAG | 58 | 30 | 234 |
Col3a1 | Collagen, type III, alpha 1 | NM_032085 | Sense antisense | AAGAGCGGAGAATACTGGGTTG CAGGATTGCCATAGCTGAACTG | 58 | 30 | 214 |
Tgfb1 | Transforming growth factor, beta 1 | NM_021578 | Sense antisense | TGCCAGAACCCCCATTGCTG TCCACCTTGGGCTTGCGACC | 70 | 35 | 700 |
Ctgf | Connective tissue growth factor | NM_022266 | Sense antisense | AGAGCTGGGTGTGTGTCCTCC GCAGCAAACACTTCCTCGTGG | 70 | 30 | 547 |
Acta2 | Actin, alpha 2, smooth muscle, aorta | NM_031004 | Sense antisense | GTGCCTATCTATGAGGGCTATGCTCTGC CATACTCCTGTTTGCTGATCCACATCTGC | 68 | 35 | 601 |
Tnf | Tumor necrosis factor | NM_012675 | Sense antisense | ATGGCATGGATCTCAAAGACAA TCTCCTGGTATGAAGTGGCAAA | 58 | 40 | 150 |
Adam17 | ADAM metallopeptidase domain 17 | AJ012603 | Sense antisense | GTGACATGAATGGCAAATGTGA TGGACAAGAATGCTGAAAGGAA | 55 | 40 | 172 |
Cd36 | CD36 molecule (thrombospondin receptor) | NM_031561 | Sense antisense | GTCGTATGGTGTGCTGGACATT TGGCTTGACCAGTATGTTGACC | 62 | 35 | 217 |
Vim | Vimentin | NM_031140 | Sense antisense | GGATTTCTCTGCCTCTTCCAAA GTCATCGTGGTGCTGAGAAGTC | 62 | 35 | 164 |
Des | Desmin | NM_022531 | Sense antisense | TCCGTGCTCAGTATGAGACCAT GCATCAATCTCGCAGGTGTAGG | 62 | 35 | 181 |
Pdgfb | Platelet-derived growth factor beta polypeptide | NM_031524 | Sense antisense | AACATGACCCGAGCACATTCT TGGCTTCTTTCTCACAATTTCG | 62 | 35 | 303 |
Fn1 | Fibronectin 1 | NM_019143 | Sense antisense | GTGGTCATTTCAGATGCGATTC GGCTCCGAGATACTCTTTCTGC | 62 | 35 | 227 |
B2m | Beta-2 microglobulin | NM_12512 | Sense antisense | CGGTGACCGTGATCTTTCTGGT GGTGACGGTTTTGGGCTCCTT | 58 | 30 | 332 |
|
Rabbit oligonucleotides |
TGFB1 | Transforming growth factor, beta 1 | XM_008249704 | Sense antisense | TCATTTACCGTCACCTGGATTG TGTGTAGATGTTGAGCCCGTTC | 72 | 40 | 229 |
PDGFB | Platelet-derived growth factor beta polypeptide | XM_008257019 | Sense antisense | GGTGAGAAAGATCGAGATTGTGC GTGTGCTTGAACTTGTGGTGCT | 62 | 40 | 231 |
CTGF | Connective tissue growth factor | XM_008263527 | Sense antisense | GGGCTAAGTTCTGCGGAGTATG CATTGTCCCCAGGACAGTTGTA | 62 | 30 | 162 |
MMP3 | Matrix metallopeptidase 3 (stromelysin 1, progelatinase) | NM_001082280 | Sense antisense | TCTCTTCCTTCAGCAGTGGATG TTCCTTATCAGAAATGGCAGCA | 58 | 40 | 186 |
COL1A1 | Collagen, type I, alpha 1 | XM_008271783 | Sense antisense | CCTGGGCAGAGAGGAGAAAGAG CCTCACGTCCAGATTCACCAG | 62 | 30 | 157 |
IGFBP3 | Insulin-like growth factor binding protein 3 | NM_000598 (human) | Sense antisense | TGCCGTAGAGAAATGGAAGACA GCCCATACTTATCCACACACCA | 72 | 40 | 172 |
PPARG | Peroxisome proliferator-activated receptor gamma 1 | AY166780 | Sense antisense | TGATGAATAAAGACGGGGTCCT CCACTGAGAATGATGACGGCTA | 62 | 40 | 187 |
P4HB | Prolyl 4-hydroxylase, beta polypeptide | NM_001171047 | Sense antisense | ATGACCAAGTACAAGCCCGAGT GCGTAGAACTCCACGAAGACG | 62 | 30 | 212 |
COL3A1 | Collagen, type III, alpha 1 | XM_002712333 | Sense antisense | AAAGAAAGCCCTGAAGCTGATG CCACCAATATCATAGGGTGCAA | 62 | 30 | 195 |
B2M | Beta-2 microglobulin | XM_002717921 | Sense antisense | CGCCCCAGATTGATATTGAGTT GATCCCATTTCACTGTCATAGGC | 62 | 30 | 195 |
|