An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function

Figure 5

Matching pattern of two fragments. Pattern 1: tail-part of fragment A overlaps with the beginning of fragment B. Pattern 2: tail-parts of the two fragments overlap. Pattern 3: beginning of the two fragments overlap. Pattern 4: beginning of fragment A overlaps with end of fragment B. Pattern 5: both beginning and end of the two fragments overlap.