A Novel msDNA (Multicopy Single-Stranded DNA) Strain Present in Yersinia frederiksenii ATCC 33641 Contig01029 Enteropathogenic Bacteria with the Genomic Analysis of It's Retron
Figure 4
Phylogenetic trees among Y. frederiksenii, V. cholerae, V. parahaemolyticus, and S. Typhimurium based on the RT (a) and the 16S ribosomal RNA genes (b). The trees were constructed by using the neighbor-joining (NJ) method in the CluslalW program. The following ExPASy accession numbers for the RT sequences were used in the phylogenetic construction: Y. frederiksenii RT-Yf79-C4SUU2, V. cholerae RT-Vc95-Q9S1F2, V. parahaemolyticus-Q8L0W6, and S. Typhimurium- E7UVY4. The following GenomeNet accession numbers for the 16S rRNA sequences were used in the phylogenetic construction: Y. frederiksenii-NR_027544.1, V. cholerae-2614447, V. parahaemolyticus-1187490 and S. Typhimurium-1251767.
