Research Article
An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function
Table 2
The differences between proposed GA and Parsons' GA.
| | Our GA | Parsons' GA |
| Gene of GA chromosome | Fragment with 2 reads | reads only | Fitness function | Equation (2) | Crossover | Order-based crossover | Mutation | swap mutation + greedy mutation | Swap mutation | Heuristic part | CRed and CRef | None | Scaffolding | possible | Not possible |
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