Research Article

An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function

Table 2

The differences between proposed GA and Parsons' GA.

Our GA Parsons' GA

Gene of GA chromosomeFragment with 2 readsreads only
Fitness functionEquation (2)
Crossover Order-based crossover
Mutation swap mutation + greedy mutation Swap mutation
Heuristic partCRed and CRef None
ScaffoldingpossibleNot possible