Research Article

An Efficient Genome Fragment Assembling Using GA with Neighborhood Aware Fitness Function

Table 3

Results about contigs.

POBF AMCG
Proposed GA Parsons' GA Proposed GA Parsons' GA
Average Best Average Best Average Best Average Best

Number of contig 27.6 1 19.8 9 38.3 8 35.1 11
Length of contig 317.3 10089 342.6 1008 349.4 2795 316.4 1341
Reconstruction ratio 86.8 100 (2) 67.2 74.3 66.5 72.1 55.2 61.1
Error 0 0 0 0 0 0 0 0