Research Article

Comprehensive Analysis of Competing Endogenous RNA Network Focusing on Long Noncoding RNA Involved in Cirrhotic Hepatocellular Carcinoma

Table 3

miRNAs targeting specific mRNAs in cirrhotic HCC.

miRNAsmRNAs

hsa-miR-497-5pARHGEF12, ASPH, B4GALT1, BTN1A1, CCND1, CD84, CDCA4, EED, EYA4, GINS4, MTAP, NUP50, OTUB2, OTUD4, SEMA6D, SLC45A2, SPEN, USP12
hsa-miR-1268aBMP1, CCNF, EHD2, IP6K1, LDB3, PAX8, SCGB1A1, SIGLEC8, TGFB1I1
hsa-miR-200a-3pAAK1, AQP4,DTL, FRK, G3BP1, KLF12, MARCH6, MPZL2, PANK3, RORA, SLC35A3, ST3GAL6, STRN, TAPT1, THAP9, USP53, WDR59, WNK1, ZEB1, ZMYM6
hsa-miR-150-5pACSL6, ADH6, B4GALT1, CD84, DIO2, MARCH6, NTRK2, PRKAA2, RAD23B, RCAN1, SLC4A4, ZEB1
hsa-miR-338-3pAAK1, ACVR2B, CLN8, DGCR2, DTNA, FRK, GABRA4, GP2, MARCH6, NTRK2, PRKAA2, RNASEL, SEMA6D, SSX2IP, ZBTB43, ZG16
hsa-miR-30a-3pAQP4, ASPH, CCDC186, CDK6, DDX17, DTL, ERBB4, FBXO4, FLRT3, HACD3, MOB1A, MTAP, NTRK2, PRKAA2, PRRC1, STRN, TAP2, TMEM106B, VCPIP1
hsa-miR-146a-5pAAK1, CD84, DTNA, ERBB4, ETV6, FRK, KLF12, MTAP, MYO1B, NTRK2, PRKAA2, RNASEL, SCD, SIKE1, SORT1, SSX2IP, UBE2W
hsa-miR-1269aBCL2L1, FAM120C, FOXE1, MXD3, RGS4, SYK
hsa-miR-214-3pACVR2B, BAG5, CD84, CLN8, CRB1, DGCR2, EHHADH, FRK, KCNJ9, KRAS, LHX6, NEU3, SEMA6D, SLC2A5, TMEM106B
hsa-miR-424-5pASPH, B4GALT1, BTN1A1, CD84, CDCA4, EED, EYA4, GINS4, MTAP, NUP50, OTUB2, OTUD4, SEMA6D, SLC45A2, SLC4A4, SPEN
hsa-miR-214-5pABHD2, CCND1, CD84, DGCR2, GABBR2, KLF12, SCD, SLC28A3, ZKSCAN5
hsa-miR-193b-3pADGRE5, ARNT, BAZ2A, CHST3, COMMD9, LPCAT1, MPPED2, NPC1L1, RPS21
hsa-miR-31-5pAK4, AP3D1, BTN1A1, DYRK1A, EIF5A2, EPB41L5, FAM169A, FRK, G3BP1, HLF, MAP3K1, NXPH3, SEMA6D
hsa-miR-199a-5pACVR2B, ARHGEF12, DYRK1A, ETV6, FLRT3, MARCH6, NEU3, NPY2R, SLC35A3, SMC4, SOS2, ST3GAL6
hsa-miR-195-5pAK4, ARHGEF12, B4GALT1, EED, EYA4, MTAP, NUP50, OTUB2, OTUD4, SEMA6D, SLC4A4, SPEN
hsa-miR-125a-5pAAK1, ASPH, ENPP1, FRK, PRKAA2, RORA, SIRT5, SLC2A5, SMG1
hsa-miR-139-5pASPH, ATRX, CD164, CDCA4, MARCH6, PSME4, SSX2IP, TMPO, TNFRSF11A, ZEB1
hsa-miR-223-3pBCLAF1, CASP10, CENPN, KCNJ9, NUCKS1, PIK3C3, SLC4A4, TAP2, VCPIP1
hsa-miR-200b-3pDTNA, MRPL19, MTAP, NRIP1, OXR1, PIK3C3, SORT1, UTY, ZEB1, ZNF674
hsa-miR-10a-5pAAK1, ARHGEF12, CCDC177, CCDC186, CCDC88A, ELOVL2, RORA, SORT1, TGFBR1
hsa-miR-342-3pAK4, AQP4, CASP2, CDK6, CLN8, G3BP1, SLC16A1, SLC45A2, ZKSCAN5
hsa-miR-130a-3pAAK1, ALDH3A2, DEPDC1, EPB41L5, NEU3, PRKAA2, VCPIP1, WNK1
hsa-miR-429CCDC177, DCAF17, DTNA, EIF5A2, MRPL19, NTRK2, OXR1, UBE2W, ZEB1
hsa-miR-132-5pCCND1, CRAT, DIO2, GABRD, SCD, ZG16
hsa-miR-199a-3pACVR2B, DIO2, EPB41L5, ERBB4, NTRK2, TMEM106B
hsa-miR-130b-3pADCY1, KCNN3, SHANK2, ST18
hsa-miR-542-3pB4GALT1, CDK6, DBT, EDEM3, UFL1
hsa-miR-142-5pCDK6, ERBB4, IL6ST, OTUD4, PIK3C3, SIKE1
hsa-miR-145-3pCD84
hsa-miR-376c-3pCCDC186, DIO2, KRAS, PANK3, SMAD5
hsa-miR-142-3pCD84, PSME4, SMG1, TGFBR1
hsa-miR-139-3pABHD2, TAP2
hsa-miR-32-5pAFF3, ARHGEF17, GID4, XYLT2
hsa-miR-181a-3pCPT1A, SLCO1B3, ZNF3
hsa-miR-450a-5pPHACTR1, SMG1

miRNA: microRNA; mRNA: messenger RNA; HCC: hepatocellular carcinoma.