Elucidating the Interacting Domains of Chandipura Virus Nucleocapsid Protein
Figure 3
Docking results for NM, NP, and NG interactions using ZDOCK. (a) Top rank NM complex ZDOCK pose 684 (E_RDOCK score—31.356). (b) Top rank NP complex ZDOCK pose 220 (E_RDOCK score—27.932). (c) Top rank NG complex ZDOCK pose 8 (E_RDOCK score—40.982). CHPV proteins are represented as cartoons models. CHPV N protein is shown in blue and M, P, and G proteins are shown in red. (a) The residues of CHPV N Protein in the NM interface correspond to N1 and N2. (b) The residues of CHPV N Protein in the NP interface correspond to N1 and N3. (c) The residues of CHPV N protein in the NG interface correspond to N2 and N3 fragments. The NN interaction has been discussed previously by the authors [26].
