Research Article

Rab7 Investigation Insights into the Existence of White Spot Syndrome Virus in Crustaceans: An In Silico Approach

Table 2

Phyla-wise mutations in Rab7 sequences of different phyla.

PhylumUnique mutationCommon mutation

ArthropodaT ⟶ S (95), E ⟶ D (181)
Penaeus monodon (AGW22131)
Penaeus vannamei (AFD54570)
Macrobrachium rosenbergii (AJC97115)V ⟶ C (87), L ⟶ I (182), Y ⟶ G (183), N ⟶ H (184)
Penaeus japonicus (BAG06944)T ⟶ A (22)
Daphnia magna (XP_032777601)K ⟶ R (5), F ⟶ Y (28), K ⟶ R (31), Y ⟶ F (88), N ⟶ T (94), S ⟶ D (98), D ⟶ E (116), H ⟶ N (117), I ⟶ V (127), S ⟶ A (145), E ⟶ D (148), V ⟶ I (149), A ⟶ G (159), L ⟶ Q (164), S ⟶ T (178), E ⟶ Q (179), D ⟶ E (188), N ⟶ G (195), N ⟶ Q (197)

ChordataA ⟶ T (2), I ⟶ V (7), F ⟶ Y (28), Y ⟶ F (88), S ⟶ A (92), S ⟶ T (98), D ⟶ E (116), H ⟶ N (117), A ⟶ Q (133), S ⟶ T (135), Q ⟶ A (141), H ⟶ Q (144), E ⟶ N (148), V ⟶ I (149), L ⟶ Q (164), A ⟶ K (175), S ⟶ T (178), D ⟶ E (188), Q ⟶ P (189), T ⟶ D (193), N ⟶ R (194), D ⟶ N (195), N ⟶ D (196), K ⟶ R (197), Q ⟶ P (200)
 Cyprinodon variegatus (XP_015244901)
 Monopteros albus (XP_020463491)
 Tachysurus fulvidraco (XP_027011621
 Xenopus tropicalis (NP_001008026)S ⟶ T (34), I ⟶ V (127), Q ⟶ V (141), N ⟶ K (194), Q ⟶ A (200)
 Mastacembelus armatus (XP_026162545)Q ⟶ T (200)
Annelida

 Capitella teleta (ELU11591)A ⟶ T (2), I ⟶ V (7), F ⟶ Y (28), S ⟶ V (92), S ⟶ T (98), D ⟶ E (116), H ⟶ N (117), L ⟶ I (123), K ⟶ R (137), H ⟶ Q (144), S ⟶ T (145), N ⟶ G (147), E ⟶ D (148), V ⟶ I (149), L ⟶ Q (164), I ⟶ V (169), R ⟶ K (171), S ⟶ T (178), T ⟶ S (193), N ⟶ Q (196), K ⟶ N (197), A ⟶ K (198), K ⟶ P (199), Q ⟶ K (200)

CnideriaI ⟶ V (7), F ⟶ Y (28), Y ⟶ F (88), S ⟶ T (98), D ⟶ E (116), H ⟶ N (117), T ⟶ A (136), Q ⟶ A (141), E ⟶ D (148), V ⟶ I (149), L ⟶ Q (164), R ⟶ K (171), S ⟶ T (178), E ⟶ D (179), E ⟶ D (185), T ⟶ S (193), N ⟶ G (194), N ⟶ S (196), A ⟶ P (198), A ⟶ Q (198), Q ⟶ S (200)
 Actinia tenebrosa (XP_031566328)
 Hydra vulgaris (XP_002160165)S ⟶ A (92), T ⟶ S (95), I ⟶ V (127), A ⟶ G (159), L ⟶ H (164), N ⟶ K (172), S ⟶ A (178), T ⟶ N (193), N ⟶ P (194), K ⟶ R (199)
 Orbicella faveolata (XP_020600542)N ⟶ S (94), S ⟶ N (135), Q ⟶ S (141)
 Exaiptasia pallida (XP_020907141)E ⟶ N (148), D ⟶ E (195), Q ⟶ A (200)
 Stylophora pistillata (XP_022803551)N ⟶ T (94), A ⟶ V (133), S ⟶ M (135), K ⟶ R (191)

MolluscaI ⟶ V (7), F ⟶ Y (28), S ⟶ M (92), K ⟶ R (97), D ⟶ E (116), H ⟶ N (117), L ⟶ I (123), S ⟶ T (135), T ⟶ A (136), Q ⟶ S (141), Q ⟶ G (141), S ⟶ T (145), N ⟶ G (147), V ⟶ I (149), L ⟶ Q (164), I ⟶ V (169), R ⟶ K (171), S ⟶ T (178), E ⟶ D (179), L ⟶ I (192), T ⟶ S (193), N ⟶ Q (196), K ⟶ N (197), A ⟶ K (198), K ⟶ P (199), Q ⟶ K (200), Q ⟶ R (200)
 Lottia gigantea (XP_009066993)F ⟶ Y (98), A ⟶ S (139), N ⟶ G (196)
 Mizuhopecten yessoensis (XP_021370254)A ⟶ S (2), H ⟶ N (144), S ⟶ N (178), N ⟶ Q (196)
 Crassostrea virginica (XP_022301704)H ⟶ T (144), N ⟶ T (196), K ⟶ Q (199), Q ⟶ D (200)
 Pomacea canaliculata (XP_025108568)H ⟶ S (144), K ⟶ T (197), A ⟶ N (198)
 Octopus vulgaris (XP_029637458)D ⟶ E (53), S ⟶ A (92), P ⟶ Q (93), N ⟶ T (94), N ⟶ S (194)
Brachiopoda
 Lingula anatina (XP_013381914)A ⟶ S (2), I ⟶ V, F ⟶ Y (28), Y ⟶ F (88), S ⟶ M (92), S ⟶ T (98), D ⟶ E (116), L ⟶ I (123), Q ⟶ G (141), N ⟶ G (147), E ⟶ D (148), V ⟶ I (149), L ⟶ Q (164), I ⟶ V (169), R ⟶ K (171), S ⟶ T (178), N ⟶ A (197), K ⟶ N (198), A ⟶ K (199)

Priapulida
 Priapulus caudatus (XP_014679146)A ⟶ S (2), I ⟶ V (7), F ⟶ Y (28), Y ⟶ F (88), S ⟶ Q (92), S ⟶ G (111), H ⟶ N (117), Q ⟶ G (141), E ⟶ D (148), V ⟶ I (149), A ⟶ S (159), L ⟶ Q (164), S ⟶ T (178), E ⟶ D (179), E ⟶ D (185), N ⟶ G (194), D ⟶ E (195), N ⟶ T (196), A ⟶ P (198), K ⟶ P (199), Q ⟶ S (200)