Rab7 Investigation Insights into the Existence of White Spot Syndrome Virus in Crustaceans: An In Silico Approach

Table 3

Docking information of Rab7 protein sequences of different species.

Species	Score	RMSD from the overall lowest energy structure	Van der Waals energy	Electrostatic energy	Desolvation energy	Restraints violation energy	Buried surface area	Z-score
Actinia tenebrosa	−79.3 ± 7.3	20.8 ± 0.3	−46.5 ± 3.5	−167.2 ± 58.2	−4.8 ± 5.7	53.5 ± 17.9	1510.8 ± 20.9	−2.0
Lingula anatina	−72.3 ± 2.2	15.7 ± 0.2	−45.5 ± 2.7	−123.6 ± 9.3	−9.0 ± 2.2	70.2 ± 32.5	1467.0 ± 32.8	−1.3
Lottia gigantea	−76.3 ± 2.3	7.6 ± 0.4	−48.4 ± 5.6	−119.2 ± 35.4	−10.7 ± 1.1	66.8 ± 33.1	1482.7 ± 52.2	−1.7
Capitella teleta	−76.2 ± 3.7	1.0 ± 0.6	−37.4 ± 1.4	−237.5 ± 6.1	3.7 ± 2.8	49.6 ± 9.3	1366 ± 56.9	−1.5
Priapulus caudatus	−71.6 ± 1.7	4.0 ± 0.5	−44.6 ± 4.5	−117.4 ± 16.7	−8.0 ± 1.2	44.8 ± 29.8	1488.6 ± 104.2	−1.8
Daphnia magna	−74.1 ± 3.5	21.0 ± 0.3	−48.3 ± 3.9	−122.4 ± 34.6	−8.3 ± 1.4	70.1 ± 25.4	1470.2 ± 54.0	−1.7
Cyprinodon variegatus	−80.1 ± 3.5	7.6 ± 0.8	−45.6 ± 4.1	−160.9 ± 30.3	−9.0 ± 2.1	66.6 ± 24.6	1485.3 ± 40.4	−1.6
Penaeus vannamei	−84.9 ± 24.8	1.1 ± 0.8	−36.8 ± 3.9	−263.0 ± 123.4	0.1 ± 4.3	43.5 ± 25.1	1424.0 ± 129.8	−1.9