Methodology Report

Integrating Diverse Information to Gain More Insight into Microarray Analysis

Table 4

The important genes of network associated with genes in cancer pathways. These genes are obtained by combining three sets of hub genes from interaction network, articulation nodes, and from the minimum spanning tree of . We show the specific pathway a gene is involved with.

GenesRegulationPathway

CTSBUp
CTSDUpTgf_beta,ar
PSMD7Up
PTPN1Up
RBL2UpTgf_beta
SOD2UpTnf_alpha
ATMDown
BIDDownTnf_alpha
CASP1DownTnf_beta
CBLBDown
CCNB2DownTgf_beta
CHEK1Down
ETS1DownTgf_beta,tnf_alpha
FOSDownWnt,ar,kit
GRB10Downar
ID2DownTgf_beta,ar
MRE11ADown
NEDD4DownTgf_beta
RRM2DownEgfr1
SNCADown
TGFB2DownEgfr1,tgf_beta,tnf_alpha,ar
THBS1DownTgf_beta, tnf_alpha, id,wnt
TNFRSF1ADownTgf_beta,notch,kit
XRCC6Down