Integrating Multiple Microarray Data for Cancer Pathway Analysis Using Bootstrapping K-S Test

Table 1

List of 36 microarray datasets.

Series ID in GEO	Cancer type	Numbers of normal samples	Numbers of tumor samples	Numbers of genes	Platform ID in GEO
GSE3744	Breast cancer	7	40	54681	GPL570
GSE5764	Breast cancer	20	10	54681	GPL570
GSE7904	Breast cancer	19	43	54681	GPL570
GSE3678	Thyroid cancer	7	7	54681	GPL570
GSE3467	Thyroid cancer	9	9	54681	GPL570
GSE8977	Breast cancer	15	7	54681	GPL570
GSE8671	Colorectal cancer	32	32	54681	GPL570
GSE4290	Glioma	23	157	54681	GPL570
GSE4183	Colorectal cancer	8	30	54681	GPL570
GSE4107	Colorectal cancer	10	12	54681	GPL570
GSE8514	Aldosterone-producing adenoma	5	10	54681	GPL570
GSE6791	Cervical cancer	8	20	54681	GPL570
GSE6791	Head and neck cancer	18	38	54681	GPL570
GSE6338	Lymphoma	20	40	54681	GPL570
GSE5563	Vulvar intraepithelial neoplasia	9	9	54681	GPL570
GSE6004	Thyroid Cancer	4	14	54681	GPL570
GSE2549	Malignant pleural mesothelioma	10	44	22283	GPL96
GSE781	Kidney cancer	9	8	22283	GPL96
GSE7670	Lung cancer	27	27	22283	GPL96
GSE6344	Kidney cancer	10	10	22283	GPL96
GSE1542	Pancreatic ductal carcinoma	25	24	22283	GPL96
GSE6883	Breast cancer	6	6	22283	GPL96
GSE2724	Uterine fibroid	11	7	22283	GPL96
GSE2503	Skin cancer	6	5	22283	GPL96
GSE3268	Lung cancer	5	5	22283	GPL96
GSE9476	Acute myeloid leukemia	38	26	22283	GPL96
GSE6008	Ovarian tumor	4	99	22283	GPL96
GSE6477	Multiple myeloma	12	150	22283	GPL96
GSE4115	Lung Cancer	90	97	22283	GPL96
GSE3167	Bladder cancer	14	46	22283	GPL96
GSE2514	Pulmonary adenocarcinoma	19	20	12651	GPL91
GSE6631	Head and neck cancer	22	22	12651	GPL91
GSE6604	Prostate tumor	18	25	12651	GPL91
GSE6605
GSE6606	Prostate tumor	63	65	12651	GPL91
GSE6608
GSE2379	Head and neck cancer	4	34	12651	GPL91
GSE1987	Lung Cancer	9	28	12651	GPL91