Cytotoxic Effect of Recombinant Mycobacterium tuberculosis CFP-10/ESAT-6 Protein on the Crucial Pathways of WI-38 Cells
Table 1
The values of the descriptors constituting the composite score, Rr, and the selected pathways sorted in the ascending order of Rr derived by the pathway topology analysis.
Pathway
Density
Average significance
MD-Cluster
MUD-Cluster
Composite score
Entry
Name
hsa04510
Focal adhesion
65
0.3351
0.2697
0.00130
0.00000039
11
0.00177
13
0.00200
46
hsa00450
Selenoamino acid metabolism
14
0.4118
0.5833
0.00119
0.00000365
6
0.00195
7
0.00221
49
hsa00230
Purine metabolism
54
0.3506
0.4230
0.00501
0.00002726
44
0.00566
51
0.00523
59
hsa00271
Methionine metabolism
11
0.6875
0.3158
0.00239
0.00001452
4
0.00044
7
0.00239
59.5
hsa00260
Glycine, serine and threonine metabolism
16
0.3556
0.1391
0.00168
0.00000594
6
0.00153
8
0.00082
61.5
hsa00330
Arginine and proline metabolism
21
0.3448
0.2075
0.00207
0.00001056
10
0.00223
14
0.00388
64
hsa04512
ECM-receptor interaction
31
0.3563
0.0909
0.00076
0.00000023
2
0.00010
5
0.00058
71.5
hsa00280
Valine, leucine and isoleucine degradation
19
0.3519
0.3913
0.00636
0.00002807
10
0.00657
14
0.00760
72
hsa00310
Lysine degradation
18
0.3462
0.4231
0.00453
0.00000841
5
0.01567
5
0.00035
82
hsa00100
Biosynthesis of steroids
8
0.4444
0.3902
0.00754
0.00006827
9
0.00769
9
0.00769
87
hsa04670
Leukocyte transendothelial migration
31
0.2650
0.0656
0.00135
0.00000028
2
0.00007
3
0.00030
87.5
hsa04910
Insulin signaling pathway
41
0.3037
0.1647
0.00713
0.00001028
8
0.00535
9
0.00583
89.5
hsa00380
Tryptophan metabolism
30
0.3488
0.2289
0.00850
0.00006979
6
0.00455
7
0.00543
100
hsa00130
Ubiquinone biosynthesis
7
0.4667
0.2500
0.00672
0.00003048
2
0.00552
2
0.00552
100
hsa00564
Glycerophospholipid metabolism
19
0.2468
0.2464
0.00692
0.00005076
7
0.00742
10
0.00786
103.5
hsa00020
Citrate cycle (TCA cycle)
14
0.4643
0.1121
0.00959
0.00006191
7
0.00758
7
0.00758
105
hsa00650
Butanoate metabolism
20
0.4545
0.2326
0.00713
0.00007358
6
0.00977
6
0.00977
108
hsa04514
Cell adhesion molecules (CAMs)
36
0.2727
0.1565
0.00305
0.00009319
2
0.00195
2
0.00195
112
hsa05120
Epithelial cell signaling in Helicobacter pylori infection