Identification of NF-κB Modulation Capabilities within Human Intestinal Commensal Bacteria

Table 1

Bacteria strains, references, and growth media.

Designation	Collection reference	Medium	Phylum
Atopobium parvulum	DSM 20649T	M104	A
Bifidobacterium adolescentis	ATCC 15703	M58	A
Bifidobacterium angulatum	ATCC 27535-CIP 104167	M58	A
Bifidobacterium animalis ssp. animalis	DSM 20104	M58	A
Bifidobacterium bifidum	DSM20082/JCM1254	M58	A
Bifidobacterium breve 1	DSMZ 20091	M104	A
Bifidobacterium breve 2	ATCC 15701-89/23	M104	A
Bifidobacterium catenulatum	ATCC27539-CIP104175	M58	A
Bifidobacterium choerinum	DSM 20434	M58	A
Bifidobacterium dentium 1	ATCC 15423	M104	A
Bifidobacterium dentium 2	ATCC 27534-89/20	M104	A
Bifidobacterium gallicum	ATCC 49850-CIP 103417	M58	A
Bifidobacterium infantis	DSM20088/ATCC15697	M58	A
Bifidobacterium longum	ATCC 15707-NCTC 11818	M58	A
Bifidobacterium pseudocatenulatum	DSM 20438-ATCC 27919	M58	A
Bifidobacterium ruminantium	ATCC 49390	M58	A
Collinsella aerofaciens	ATCC 25986	BHI**	A
Propionibacterium acnes	B15	M104	A
Bacteroides caecae	ATCC 43185-CIP 104201T	BHI	B
Bacteroides dorei	DSM 17855	M104	B
Bacteroides fragilis	B6-AL 2553	BHI	B
Bacteroides ovatus	ATCC 8483-CIP103756	M104	B
Bacteroides thetaiotaomicron	ATCC 29148-VPI5482	M104	B
Bacteroides uniformis	ATCC 8492	M104	B
Bacteroides vulgatus	ATCC 8482-CIP 103714	BHI	B
Parabacteroides distasonis	CIP104284-ATCC8503	BHI	B
Parabacteroides johnsonii	DSM 18315	M104	B
Prevotella copri	DSM 18205	M104	B
Blautia/Clostridium coccoides	ATCC 2936	BHI	F
Blautia producta/Ruminococcus productus	DSMZ 2950-92/46	M104	F
Blautia/Ruminococcus hansenii	DSM 20583	M104	F
Butyrivibrio fibrisolvens	DSM3071	BHI	F
Clostridium leptum	ATCC29065-DSM753	BHI	F
Clostridium nexile 96/2	ATCC 27757-DSM 1787	BHI	F
Clostridium paraputrificum	G12PR-X73445	BHI	F
Clostridium sardiniensis	I11PR	M78	F
Clostridium sordellii	ATCC 9714	BHI	F
Clostridium sporosphaeroides	ATCC 25781	M78	F
Dorea/Eubacterium formicigenerans	ATCC 27755	L-DON*	F
Eubacterium rectale	ATCC 33656-CIP105953	BHI	F
Faecalibacterium prausnitzii	L2-6 (Duncan)	BHI	F
Roseburia faecis	DSM 16840	BHI	F
Roseburia hominis	DSM 16839	M58	F
Roseburia intestinalis	DSM 14610	M58	F
Ruminococcus gnavus	FRE1	L-DON	F
Ruminococcus lactaris	ATCC 29176	L-DON	F
Ruminococcus obeum	ATCC 29174	L-DON	F
Ruminococcus torques	ATCC 27756	M104	F
Selenomonas ruminantium	ATCC19205-DSM2872	L-DON	F

*Yeast extract-CaCl2—sodium thioglycholate—pyruvic acid.
**Brain heart infusion + yeast extract and hemine.
A: Actinobacteria; B: Bacteroidetes; F: Firmicutes.