Review Article

Bacterial Artificial Chromosome Mutagenesis Using Recombineering

Figure 1

General applications of recombineering in BAC modifications. Recombineering is applicable in various mutagenesis strategies, depending on the design and nature of the targeting substrate and target site; see text for more details. Stippled boxes denote homologous sequences for recombination. (a) Gene replacement. Recombineering can be employed to replace a target site with any sequence of interest. (b) Insertion. DNA can also be introduced by recombineering without removing any of the existing sequence. (c) Selection/counterselection. Recombineering can mediate subtle modifications such as nucleotide substitutions via two rounds of recombinations, by first introducing a selectable cassette followed by replacement of the cassette with the modified version of the target site. (d) Gap repair cloning. A target site of interest can be cloned from a fragment or plasmid into a linearised vector in vivo by recombineering, through recombination between the ends of the cloning vector and target site.
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(a) Gene replacement
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(b) Insertion
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(c) Selection/counterselection
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(d) Gap repair cloning