MOfinder: A Novel Algorithm for Detecting Overlapping Modules from Protein-Protein Interaction Network

Table 1

Statistics for the major module size and other features when applied six methods to the yeast PPI data.

Methods	Major module Size	Predicted modules	Covered proteins	Functional percentage
MCODE	3	21	64	85.7%
CFinder	4	53	184	81.1%
COACH	3	382	861	46.6%
NeMo	4	121	485	38.0%
LPCF	10	1601	4549	49.5%
MOfinder	5	125	335	90.4%